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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170506144
CEVW01135774
400818
Bacteroidota
TTC
Glu
>WENV170506627
CEVW01305542
288475
Bacteroidota
GCC
Gly
>WENV170506262
CEVW01140740
198599
Bacteroidota
GTG
His
>WENV170504957
CEVW01016436
156605
Bacteroidota
GAC
Val
>WENV170506094
CEVW01132621
23370
Bacteroidota
GGA
Ser
>WENV170505585
CEVW01077941
240785
Bacteroidota
GTC
Asp
>WENV170505634
CEVW01082948
402171
Bacteroidota
TTC
Glu
>WENV170505712
CEVW01093344
193718
Bacteroidota
GTC
Asp
>WENV170506208
CEVW01138031
299032
Bacteroidota
GCC
Gly
>WENV170505357
CEVW01054636
117927
Bacteroidota
TAG
Leu
>WENV170504871
CEVW01010071
284409
Bacteroidota
CAT
Met
>WENV170504784
CEVW01003232
372845
Bacteroidota
CCA
Trp
>WENV170504836
CEVW01007833
372845
Bacteroidota
CCA
Trp
>WENV170505110
CEVW01030226
372845
Bacteroidota
CCA
Trp
>WENV170504832
CEVW01007656
182234
Bacteroidota
TGT
Thr
>WENV170505289
CEVW01047750
361792
Bacteroidota
GAA
Phe
>WENV170505299
CEVW01049203
179598
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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