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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170507617
CEVX01068677
400818
Bacteroidota
TTC
Glu
>WENV170507772
CEVX01088691
400818
Bacteroidota
TTC
Glu
>WENV170508232
CEVX01142517
400818
Bacteroidota
TTC
Glu
>WENV170507196
CEVX01025015
288475
Bacteroidota
GCC
Gly
>WENV170507970
CEVX01113609
156595
Bacteroidota
TGG
Pro
>WENV170508424
CEVX01164173
156611
Bacteroidota
TAC
Val
>WENV170507274
CEVX01032581
156605
Bacteroidota
GAC
Val
>WENV170507769
CEVX01088294
156605
Bacteroidota
GAC
Val
>WENV170507011
CEVX01010769
240785
Bacteroidota
GTC
Asp
>WENV170508288
CEVX01149011
240785
Bacteroidota
GTC
Asp
>WENV170508587
CEVX01172994
240785
Bacteroidota
GTC
Asp
>WENV170508089
CEVX01124178
155786
Bacteroidota
TGG
Pro
>WENV170508457
CEVX01166495
402171
Bacteroidota
TTC
Glu
>WENV170507283
CEVX01033419
291910
Bacteroidota
TTG
Gln
>WENV170508401
CEVX01161308
366169
Bacteroidota
GAA
Phe
>WENV170507203
CEVX01025353
227539
Bacteroidota
GTT
Asn
>WENV170508280
CEVX01148610
227539
Bacteroidota
GTT
Asn
>WENV170506988
CEVX01008906
235895
Bacteroidota
GTT
Asn
>WENV170507177
CEVX01024112
156596
Bacteroidota
TAC
Val
>WENV170507267
CEVX01032260
156596
Bacteroidota
TAC
Val
>WENV170508138
CEVX01130693
338178
Bacteroidota
CAT
Met
>WENV170506909
CEVX01001408
299065
Bacteroidota
TTG
Gln
>WENV170507315
CEVX01036123
299065
Bacteroidota
TTG
Gln
>WENV170508373
CEVX01158604
299065
Bacteroidota
TTG
Gln
>WENV170508475
CEVX01167608
299065
Bacteroidota
TTG
Gln
>WENV170507225
CEVX01027864
286857
Bacteroidota
TTT
Lys
>WENV170507738
CEVX01083733
193718
Bacteroidota
GTC
Asp
>WENV170508331
CEVX01153931
193718
Bacteroidota
GTC
Asp
>WENV170507798
CEVX01092390
372845
Bacteroidota
CCA
Trp
>WENV170507706
CEVX01079503
408604
Bacteroidota
GGT
Thr
>WENV170508307
CEVX01151156
361792
Bacteroidota
GAA
Phe
>WENV170508560
CEVX01172408
156424
Bacteroidota
TGG
Pro
>WENV170506935
CEVX01004596
179598
Bacteroidota
CAT
Met
>WENV170507309
CEVX01035541
156340
Bacteroidota
GGG
Pro
>WENV170507364
CEVX01043506
56162
Bacteroidota
TGA
Ser
>WENV170508197
CEVX01137626
299085
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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