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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170512722
CEVZ01226198
372845
Bacteroidota
CCA
Trp
>WENV170510545
CEVZ01009776
372845
Bacteroidota
CCA
Trp
>WENV170510769
CEVZ01027984
222068
Bacteroidota
GAT
Ile
>WENV170510772
CEVZ01028152
222068
Bacteroidota
GAT
Ile
>WENV170512123
CEVZ01155999
24958
Bacteroidota
GGA
Ser
>WENV170513004
CEVZ01272819
408604
Bacteroidota
GGT
Thr
>WENV170512194
CEVZ01164829
240785
Bacteroidota
GTC
Asp
>WENV170510936
CEVZ01040360
206043
Bacteroidota
GTC
Asp
>WENV170512371
CEVZ01186627
181598
Bacteroidota
GTT
Asn
>WENV170512875
CEVZ01240987
121312
Bacteroidota
TAG
Leu
>WENV170512583
CEVZ01209995
364431
Bacteroidota
TCC
Gly
>WENV170511306
CEVZ01070364
183480
Bacteroidota
TGC
Ala
>WENV170510641
CEVZ01016476
156595
Bacteroidota
TGG
Pro
>WENV170510815
CEVZ01030921
155808
Bacteroidota
TGG
Pro
>WENV170511429
CEVZ01083515
182234
Bacteroidota
TGT
Thr
>WENV170511256
CEVZ01066088
400818
Bacteroidota
TTC
Glu
>WENV170511660
CEVZ01106122
400818
Bacteroidota
TTC
Glu
>WENV170510468
CEVZ01002551
299065
Bacteroidota
TTG
Gln
>WENV170510899
CEVZ01037630
299085
Bacteroidota
TTT
Lys
>WENV170512077
CEVZ01150183
299085
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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