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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170517970
CEWE01076426
156605
Bacteroidota
GAC
Val
>WENV170518617
CEWE01145029
156605
Bacteroidota
GAC
Val
>WENV170519786
CEWE01257962
23370
Bacteroidota
GGA
Ser
>WENV170517605
CEWE01047659
121312
Bacteroidota
TAG
Leu
>WENV170517843
CEWE01065671
227539
Bacteroidota
GTT
Asn
>WENV170519425
CEWE01236062
227539
Bacteroidota
GTT
Asn
>WENV170518036
CEWE01082939
235895
Bacteroidota
GTT
Asn
>WENV170518674
CEWE01151903
235895
Bacteroidota
GTT
Asn
>WENV170518961
CEWE01184816
235895
Bacteroidota
GTT
Asn
>WENV170518563
CEWE01139075
286857
Bacteroidota
TTT
Lys
>WENV170517164
CEWE01014831
299032
Bacteroidota
GCC
Gly
>WENV170517689
CEWE01054021
231584
Bacteroidota
TCT
Arg
>WENV170518236
CEWE01103251
231584
Bacteroidota
TCT
Arg
>WENV170518561
CEWE01138764
231584
Bacteroidota
TCT
Arg
>WENV170519597
CEWE01247236
231584
Bacteroidota
TCT
Arg
>WENV170518775
CEWE01161643
347386
Bacteroidota
CCA
Trp
>WENV170519945
CEWE01263477
282832
Bacteroidota
TTG
Gln
>WENV170517052
CEWE01006031
206043
Bacteroidota
GTC
Asp
>WENV170518376
CEWE01119346
233847
Bacteroidota
TGC
Ala
>WENV170519735
CEWE01254937
361792
Bacteroidota
GAA
Phe
>WENV170520000
CEWE01264158
178366
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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