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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170521332
CEWG01001026
372845
Bacteroidota
CCA
Trp
>WENV170521412
CEWG01007245
240785
Bacteroidota
GTC
Asp
>WENV170521466
CEWG01011245
400818
Bacteroidota
TTC
Glu
>WENV170521478
CEWG01011913
284409
Bacteroidota
CAT
Met
>WENV170521479
CEWG01011943
156340
Bacteroidota
GGG
Pro
>WENV170521510
CEWG01013472
155808
Bacteroidota
TGG
Pro
>WENV170521553
CEWG01017233
372845
Bacteroidota
CCA
Trp
>WENV170521575
CEWG01020172
240785
Bacteroidota
GTC
Asp
>WENV170521629
CEWG01024216
284409
Bacteroidota
CAT
Met
>WENV170521660
CEWG01026705
299085
Bacteroidota
TTT
Lys
>WENV170521696
CEWG01028824
299065
Bacteroidota
TTG
Gln
>WENV170521702
CEWG01029070
156605
Bacteroidota
GAC
Val
>WENV170521742
CEWG01032469
364431
Bacteroidota
TCC
Gly
>WENV170521754
CEWG01033558
361792
Bacteroidota
GAA
Phe
>WENV170521778
CEWG01036060
156605
Bacteroidota
GAC
Val
>WENV170521814
CEWG01039197
288475
Bacteroidota
GCC
Gly
>WENV170521816
CEWG01039211
400818
Bacteroidota
TTC
Glu
>WENV170521864
CEWG01042810
240785
Bacteroidota
GTC
Asp
>WENV170521919
CEWG01047661
356595
Bacteroidota
TTT
Lys
>WENV170521968
CEWG01052987
56162
Bacteroidota
TGA
Ser
>WENV170521998
CEWG01057221
291910
Bacteroidota
TTG
Gln
>WENV170522002
CEWG01057645
340026
Bacteroidota
CAT
Met
>WENV170522012
CEWG01058656
231584
Bacteroidota
TCT
Arg
>WENV170522034
CEWG01060524
361792
Bacteroidota
GAA
Phe
>WENV170522039
CEWG01061098
231584
Bacteroidota
TCT
Arg
>WENV170522062
CEWG01063209
366169
Bacteroidota
GAA
Phe
>WENV170522068
CEWG01063336
361792
Bacteroidota
GAA
Phe
>WENV170522102
CEWG01067083
227539
Bacteroidota
GTT
Asn
>WENV170522129
CEWG01070824
156340
Bacteroidota
GGG
Pro
>WENV170522135
CEWG01071282
197494
Bacteroidota
GTC
Asp
>WENV170522142
CEWG01072820
372845
Bacteroidota
CCA
Trp
>WENV170522189
CEWG01075985
364431
Bacteroidota
TCC
Gly
>WENV170522208
CEWG01077109
193718
Bacteroidota
GTC
Asp
>WENV170522320
CEWG01086220
193718
Bacteroidota
GTC
Asp
>WENV170522330
CEWG01087385
156596
Bacteroidota
TAC
Val
>WENV170522334
CEWG01087646
183480
Bacteroidota
TGC
Ala
>WENV170522379
CEWG01092268
400818
Bacteroidota
TTC
Glu
>WENV170522490
CEWG01102890
299065
Bacteroidota
TTG
Gln
>WENV170522552
CEWG01108770
400818
Bacteroidota
TTC
Glu
>WENV170522568
CEWG01110277
231584
Bacteroidota
TCT
Arg
>WENV170522573
CEWG01111053
281538
Bacteroidota
GAA
Phe
>WENV170522663
CEWG01119648
155808
Bacteroidota
TGG
Pro
>WENV170522671
CEWG01120868
361792
Bacteroidota
GAA
Phe
>WENV170522679
CEWG01121767
400818
Bacteroidota
TTC
Glu
>WENV170522754
CEWG01129104
227539
Bacteroidota
GTT
Asn
>WENV170522782
CEWG01131193
400818
Bacteroidota
TTC
Glu
>WENV170522923
CEWG01146135
372845
Bacteroidota
CCA
Trp
>WENV170522998
CEWG01154623
299032
Bacteroidota
GCC
Gly
>WENV170523010
CEWG01156152
56162
Bacteroidota
TGA
Ser
>WENV170523020
CEWG01157747
447465
Bacteroidota
CCT
Arg
>WENV170523079
CEWG01164920
227539
Bacteroidota
GTT
Asn
>WENV170523154
CEWG01175992
235895
Bacteroidota
GTT
Asn
>WENV170523245
CEWG01186144
361792
Bacteroidota
GAA
Phe
>WENV170523277
CEWG01190214
372845
Bacteroidota
CCA
Trp
>WENV170523322
CEWG01194126
121312
Bacteroidota
TAG
Leu
>WENV170523350
CEWG01197930
231584
Bacteroidota
TCT
Arg
>WENV170523432
CEWG01205864
56162
Bacteroidota
TGA
Ser
>WENV170523462
CEWG01209831
235895
Bacteroidota
GTT
Asn
>WENV170523466
CEWG01210356
227539
Bacteroidota
GTT
Asn
>WENV170523588
CEWG01218367
56162
Bacteroidota
TGA
Ser
>WENV170523601
CEWG01219217
361792
Bacteroidota
GAA
Phe
>WENV170523619
CEWG01220489
231584
Bacteroidota
TCT
Arg
>WENV170523653
CEWG01222977
200516
Bacteroidota
CAT
Met
>WENV170523675
CEWG01223961
155808
Bacteroidota
TGG
Pro
>WENV170524131
CEWG01399916
186849
Bacteroidota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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