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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170526188
CEWI01011671
303411
Bacteroidota
>WENV170527373
CEWI01140175
193675
Bacteroidota
CAT
Met
>WENV170527010
CEWI01099817
179598
Bacteroidota
CAT
Met
>WENV170526603
CEWI01049785
372845
Bacteroidota
CCA
Trp
>WENV170526663
CEWI01055977
281538
Bacteroidota
GAA
Phe
>WENV170526684
CEWI01058735
366169
Bacteroidota
GAA
Phe
>WENV170527162
CEWI01122010
156605
Bacteroidota
GAC
Val
>WENV170526725
CEWI01063133
23370
Bacteroidota
GGA
Ser
>WENV170527744
CEWI01262314
183378
Bacteroidota
GGC
Ala
>WENV170527188
CEWI01124532
240785
Bacteroidota
GTC
Asp
>WENV170526778
CEWI01070290
206043
Bacteroidota
GTC
Asp
>WENV170526844
CEWI01079741
198599
Bacteroidota
GTG
His
>WENV170527135
CEWI01117984
227539
Bacteroidota
GTT
Asn
>WENV170527338
CEWI01139176
117927
Bacteroidota
TAG
Leu
>WENV170526212
CEWI01013821
364431
Bacteroidota
TCC
Gly
>WENV170527372
CEWI01140148
364431
Bacteroidota
TCC
Gly
>WENV170526501
CEWI01040109
56162
Bacteroidota
TGA
Ser
>WENV170526346
CEWI01024478
177083
Bacteroidota
TGT
Thr
>WENV170526075
CEWI01002737
399343
Bacteroidota
TTC
Glu
>WENV170526076
CEWI01002737
399343
Bacteroidota
TTC
Glu
>WENV170527217
CEWI01127581
299065
Bacteroidota
TTG
Gln
>WENV170527381
CEWI01140384
299065
Bacteroidota
TTG
Gln
>WENV170526094
CEWI01004248
356216
Bacteroidota
TTT
Lys
>WENV170526545
CEWI01043581
299085
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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