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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170535532
CEWP01071392
347386
Bacteroidota
CCA
Trp
>WENV170535893
CEWP01120830
347386
Bacteroidota
CCA
Trp
>WENV170535924
CEWP01125071
347386
Bacteroidota
CCA
Trp
>WENV170536208
CEWP01161402
347386
Bacteroidota
CCA
Trp
>WENV170535540
CEWP01073124
447465
Bacteroidota
CCT
Arg
>WENV170536048
CEWP01142272
296664
Bacteroidota
GAA
Phe
>WENV170536362
CEWP01171191
361792
Bacteroidota
GAA
Phe
>WENV170535302
CEWP01043961
156605
Bacteroidota
GAC
Val
>WENV170535551
CEWP01074266
156605
Bacteroidota
GAC
Val
>WENV170535179
CEWP01031517
23370
Bacteroidota
GGA
Ser
>WENV170535919
CEWP01124155
23370
Bacteroidota
GGA
Ser
>WENV170535124
CEWP01028021
120026
Bacteroidota
GTA
Tyr
>WENV170535203
CEWP01034196
120026
Bacteroidota
GTA
Tyr
>WENV170534964
CEWP01012670
117928
Bacteroidota
GTA
Tyr
>WENV170535035
CEWP01019078
117928
Bacteroidota
GTA
Tyr
>WENV170535367
CEWP01052518
240785
Bacteroidota
GTC
Asp
>WENV170536352
CEWP01170676
197494
Bacteroidota
GTC
Asp
>WENV170535127
CEWP01028069
186597
Bacteroidota
GTG
His
>WENV170536412
CEWP01172580
181598
Bacteroidota
GTT
Asn
>WENV170534950
CEWP01010940
156596
Bacteroidota
TAC
Val
>WENV170535860
CEWP01117141
156596
Bacteroidota
TAC
Val
>WENV170534884
CEWP01004415
156255
Bacteroidota
TAC
Val
>WENV170536449
CEWP01172961
118418
Bacteroidota
TAG
Leu
>WENV170535050
CEWP01019828
176707
Bacteroidota
TCT
Arg
>WENV170535591
CEWP01079521
62756
Bacteroidota
TGA
Ser
>WENV170536315
CEWP01168083
56162
Bacteroidota
TGA
Ser
>WENV170534907
CEWP01006362
185890
Bacteroidota
TGC
Ala
>WENV170535989
CEWP01134136
233847
Bacteroidota
TGC
Ala
>WENV170536060
CEWP01144803
233847
Bacteroidota
TGC
Ala
>WENV170535424
CEWP01059814
155786
Bacteroidota
TGG
Pro
>WENV170534928
CEWP01008088
155808
Bacteroidota
TGG
Pro
>WENV170535560
CEWP01075646
155808
Bacteroidota
TGG
Pro
>WENV170535005
CEWP01015623
400818
Bacteroidota
TTC
Glu
>WENV170536020
CEWP01139184
400818
Bacteroidota
TTC
Glu
>WENV170536274
CEWP01166102
400818
Bacteroidota
TTC
Glu
>WENV170535057
CEWP01020437
399343
Bacteroidota
TTC
Glu
>WENV170535114
CEWP01026827
399343
Bacteroidota
TTC
Glu
>WENV170536326
CEWP01169066
287319
Bacteroidota
TTT
Lys
>WENV170535461
CEWP01063714
282369
Bacteroidota
TTT
Lys
>WENV170535594
CEWP01079921
365090
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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