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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170537349
CEWR01000847
118749
Bacteroidota
GTA
Tyr
>WENV170537363
CEWR01001692
281190
Bacteroidota
CAT
Met
>WENV170537384
CEWR01003200
481829
Bacteroidota
GCA
Cys
>WENV170537476
CEWR01009261
402532
Bacteroidota
GCC
Gly
>WENV170537510
CEWR01010826
177083
Bacteroidota
TGT
Thr
>WENV170537520
CEWR01011733
402090
Bacteroidota
TTG
Gln
>WENV170537545
CEWR01013008
402390
Bacteroidota
TTC
Glu
>WENV170537576
CEWR01015369
62756
Bacteroidota
TGA
Ser
>WENV170537583
CEWR01015974
156424
Bacteroidota
TGG
Pro
>WENV170537599
CEWR01017352
222068
Bacteroidota
GAT
Ile
>WENV170537621
CEWR01018980
118418
Bacteroidota
TAG
Leu
>WENV170537725
CEWR01025004
156524
Bacteroidota
TAC
Val
>WENV170537726
CEWR01025236
299065
Bacteroidota
TTG
Gln
>WENV170537732
CEWR01025671
320084
Bacteroidota
TTT
Lys
>WENV170537818
CEWR01030864
193718
Bacteroidota
GTC
Asp
>WENV170537826
CEWR01031559
299085
Bacteroidota
TTT
Lys
>WENV170537907
CEWR01038272
299085
Bacteroidota
TTT
Lys
>WENV170537917
CEWR01038756
155786
Bacteroidota
TGG
Pro
>WENV170537957
CEWR01040837
176817
Bacteroidota
CAT
Met
>WENV170537972
CEWR01042503
120026
Bacteroidota
GTA
Tyr
>WENV170537985
CEWR01043153
177083
Bacteroidota
TGT
Thr
>WENV170537984
CEWR01043153
156424
Bacteroidota
TGG
Pro
>WENV170538031
CEWR01047068
162868
Bacteroidota
TAC
Val
>WENV170538043
CEWR01047743
177083
Bacteroidota
TGT
Thr
>WENV170538052
CEWR01049374
74253
Bacteroidota
GCT
Ser
>WENV170538112
CEWR01054978
402343
Bacteroidota
CCA
Trp
>WENV170538116
CEWR01055378
176863
Bacteroidota
CAT
Met
>WENV170538221
CEWR01062495
320084
Bacteroidota
TTT
Lys
>WENV170538284
CEWR01066788
289409
Bacteroidota
TCC
Gly
>WENV170538398
CEWR01077251
320084
Bacteroidota
TTT
Lys
>WENV170538461
CEWR01082255
118418
Bacteroidota
TAG
Leu
>WENV170538463
CEWR01082773
56162
Bacteroidota
TGA
Ser
>WENV170538520
CEWR01088833
206043
Bacteroidota
GTC
Asp
>WENV170538542
CEWR01091200
320084
Bacteroidota
TTT
Lys
>WENV170538687
CEWR01106503
281190
Bacteroidota
CAT
Met
>WENV170538800
CEWR01120344
303411
Bacteroidota
>WENV170538910
CEWR01131919
402343
Bacteroidota
CCA
Trp
>WENV170538917
CEWR01132698
156596
Bacteroidota
TAC
Val
>WENV170538984
CEWR01140406
289409
Bacteroidota
TCC
Gly
>WENV170539015
CEWR01143186
320084
Bacteroidota
TTT
Lys
>WENV170539023
CEWR01143600
296664
Bacteroidota
GAA
Phe
>WENV170539065
CEWR01146789
281190
Bacteroidota
CAT
Met
>WENV170539073
CEWR01147605
118418
Bacteroidota
TAG
Leu
>WENV170539101
CEWR01149529
118418
Bacteroidota
TAG
Leu
>WENV170539149
CEWR01153710
399343
Bacteroidota
TTC
Glu
>WENV170539198
CEWR01155320
296664
Bacteroidota
GAA
Phe
>WENV170539203
CEWR01155600
296664
Bacteroidota
GAA
Phe
>WENV170539210
CEWR01156240
296664
Bacteroidota
GAA
Phe
>WENV170539243
CEWR01157850
209351
Bacteroidota
CAT
Met
>WENV170539261
CEWR01158534
162868
Bacteroidota
TAC
Val
>WENV170539270
CEWR01158849
23370
Bacteroidota
GGA
Ser
>WENV170539289
CEWR01159380
296664
Bacteroidota
GAA
Phe
>WENV170539295
CEWR01159546
289409
Bacteroidota
TCC
Gly
>WENV170539609
CEWR01268426
399285
Bacteroidota
TTC
Glu
>WENV170539743
CEWR01289616
281338
Bacteroidota
TTT
Lys
>WENV170539787
CEWR01293153
282369
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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