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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170539993
CWGR01000176
280532
Bacteroidota
>WENV170539955
CWGR01000017
280557
Bacteroidota
CAT
Met
>WENV170539958
CWGR01000038
175936
Bacteroidota
CAT
Met
>WENV170539986
CWGR01000146
399026
Bacteroidota
CCT
Arg
>WENV170539975
CWGR01000093
351598
Bacteroidota
CGG
Pro
>WENV170539984
CWGR01000135
322836
Bacteroidota
CGT
Thr
>WENV170539952
CWGR01000006
398860
Bacteroidota
CTC
Glu
>WENV170539961
CWGR01000045
480318
Bacteroidota
CTG
Gln
>WENV170539990
CWGR01000176
73057
Bacteroidota
GAG
Leu
>WENV170539981
CWGR01000111
398836
Bacteroidota
GCA
Cys
>WENV170539954
CWGR01000008
27524
Bacteroidota
GGA
Ser
>WENV170539971
CWGR01000079
229246
Bacteroidota
GGC
Ala
>WENV170539962
CWGR01000045
174201
Bacteroidota
GGG
Pro
>WENV170539968
CWGR01000073
398872
Bacteroidota
GGT
Thr
>WENV170539972
CWGR01000081
117804
Bacteroidota
TAG
Leu
>WENV170539956
CWGR01000029
176192
Bacteroidota
TCT
Arg
>WENV170539980
CWGR01000103
69204
Bacteroidota
TGA
Ser
>WENV170539979
CWGR01000102
480404
Bacteroidota
TTG
Gln
>WENV170539950
CWGR01000005
365112
Bacteroidota
TTT
Lys
>WENV170539978
CWGR01000098
365112
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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