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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170547810
CXTT01000013
280532
Bacteroidota
>WENV170547809
CXTT01000013
398836
Bacteroidota
GCA
Cys
>WENV170547814
CXTT01000014
57807
Bacteroidota
TGA
Ser
>WENV170547815
CXTT01000014
57807
Bacteroidota
TGA
Ser
>WENV170547817
CXTT01000015
398860
Bacteroidota
CTC
Glu
>WENV170547819
CXTT01000017
175844
Bacteroidota
GGC
Ala
>WENV170547825
CXTT01000042
280557
Bacteroidota
CAT
Met
>WENV170547827
CXTT01000048
176192
Bacteroidota
TCT
Arg
>WENV170547833
CXTT01000062
480404
Bacteroidota
TTG
Gln
>WENV170547836
CXTT01000071
398872
Bacteroidota
GGT
Thr
>WENV170547837
CXTT01000072
20766
Bacteroidota
GGA
Ser
>WENV170547838
CXTT01000074
117804
Bacteroidota
TAG
Leu
>WENV170547839
CXTT01000075
399026
Bacteroidota
CCT
Arg
>WENV170547840
CXTT01000081
158068
Bacteroidota
GGG
Pro
>WENV170547841
CXTT01000084
480318
Bacteroidota
CTG
Gln
>WENV170547845
CXTT01000112
99847
Bacteroidota
GTA
Tyr
>WENV170547849
CXTT01000125
73057
Bacteroidota
GAG
Leu
>WENV170547853
CXTT01000137
175936
Bacteroidota
CAT
Met
>WENV170547881
CXTT01001007
73057
Bacteroidota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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