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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170548116
CXUA01000075
280532
Bacteroidota
>WENV170548125
CXUA01000089
280557
Bacteroidota
CAT
Met
>WENV170548140
CXUA01000196
175936
Bacteroidota
CAT
Met
>WENV170548130
CXUA01000121
399026
Bacteroidota
CCT
Arg
>WENV170548113
CXUA01000058
351598
Bacteroidota
CGG
Pro
>WENV170548168
CXUA01000885
351598
Bacteroidota
CGG
Pro
>WENV170548096
CXUA01000015
322836
Bacteroidota
CGT
Thr
>WENV170548107
CXUA01000044
398860
Bacteroidota
CTC
Glu
>WENV170548102
CXUA01000041
480318
Bacteroidota
CTG
Gln
>WENV170548151
CXUA01000256
73057
Bacteroidota
GAG
Leu
>WENV170548108
CXUA01000047
398836
Bacteroidota
GCA
Cys
>WENV170548126
CXUA01000094
27524
Bacteroidota
GGA
Ser
>WENV170548120
CXUA01000077
229246
Bacteroidota
GGC
Ala
>WENV170548143
CXUA01000201
398872
Bacteroidota
GGT
Thr
>WENV170548115
CXUA01000064
99847
Bacteroidota
GTA
Tyr
>WENV170548124
CXUA01000088
117804
Bacteroidota
TAG
Leu
>WENV170548121
CXUA01000084
176192
Bacteroidota
TCT
Arg
>WENV170548095
CXUA01000009
69204
Bacteroidota
TGA
Ser
>WENV170548155
CXUA01000257
69204
Bacteroidota
TGA
Ser
>WENV170548118
CXUA01000075
169545
Bacteroidota
TGG
Pro
>WENV170548119
CXUA01000075
169545
Bacteroidota
TGG
Pro
>WENV170548146
CXUA01000222
480404
Bacteroidota
TTG
Gln
>WENV170548127
CXUA01000098
365112
Bacteroidota
TTT
Lys
>WENV170548136
CXUA01000135
365112
Bacteroidota
TTT
Lys
>WENV170548173
CXUA01001089
365112
Bacteroidota
TTT
Lys
>WENV170548176
CXUA01001153
365112
Bacteroidota
TTT
Lys
>WENV170548111
CXUA01000057
365112
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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