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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180003146
FLNY01005021
118221
Bacteroidota
CAA
Leu
>WENV180002754
FLNY01003764
118465
Bacteroidota
CAA
Leu
>WENV180002995
FLNY01004531
118465
Bacteroidota
CAA
Leu
>WENV180002848
FLNY01004050
481045
Bacteroidota
CCC
Gly
>WENV180002549
FLNY01002439
284236
Bacteroidota
CGG
Pro
>WENV180002676
FLNY01003244
283315
Bacteroidota
CGT
Thr
>WENV180002847
FLNY01004050
283315
Bacteroidota
CGT
Thr
>WENV180002188
FLNY01000122
404109
Bacteroidota
CTC
Glu
>WENV180002846
FLNY01004048
404109
Bacteroidota
CTC
Glu
>WENV180002952
FLNY01004320
186142
Bacteroidota
GAT
Ile
>WENV180002280
FLNY01000501
189252
Bacteroidota
GGC
Ala
>WENV180002140
FLNY01000030
400161
Bacteroidota
GGT
Thr
>WENV180002194
FLNY01000124
400161
Bacteroidota
GGT
Thr
>WENV180002662
FLNY01003152
400161
Bacteroidota
GGT
Thr
>WENV180002871
FLNY01004090
400161
Bacteroidota
GGT
Thr
>WENV180002741
FLNY01003753
405877
Bacteroidota
GGT
Thr
>WENV180002157
FLNY01000049
187400
Bacteroidota
GTT
Asn
>WENV180002182
FLNY01000119
187400
Bacteroidota
GTT
Asn
>WENV180002294
FLNY01000573
187400
Bacteroidota
GTT
Asn
>WENV180002295
FLNY01000573
187400
Bacteroidota
GTT
Asn
>WENV180002296
FLNY01000573
187400
Bacteroidota
GTT
Asn
>WENV180002437
FLNY01001929
187400
Bacteroidota
GTT
Asn
>WENV180002446
FLNY01001933
187400
Bacteroidota
GTT
Asn
>WENV180002615
FLNY01003038
187400
Bacteroidota
GTT
Asn
>WENV180002637
FLNY01003072
187400
Bacteroidota
GTT
Asn
>WENV180002682
FLNY01003298
187400
Bacteroidota
GTT
Asn
>WENV180002821
FLNY01003996
187400
Bacteroidota
GTT
Asn
>WENV180002857
FLNY01004065
187400
Bacteroidota
GTT
Asn
>WENV180002920
FLNY01004282
187400
Bacteroidota
GTT
Asn
>WENV180002979
FLNY01004400
187400
Bacteroidota
GTT
Asn
>WENV180002263
FLNY01000212
157895
Bacteroidota
TAC
Val
>WENV180002902
FLNY01004248
157895
Bacteroidota
TAC
Val
>WENV180002912
FLNY01004271
157895
Bacteroidota
TAC
Val
>WENV180002439
FLNY01001929
56385
Bacteroidota
TGA
Ser
>WENV180003130
FLNY01004995
56318
Bacteroidota
TGA
Ser
>WENV180002184
FLNY01000121
191205
Bacteroidota
TGG
Pro
>WENV180002540
FLNY01002438
179697
Bacteroidota
TGT
Thr
>WENV180003133
FLNY01004995
282852
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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