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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170570913
FLOH01000037
480994
Bacteroidota
>WENV170572592
FLOH01001004
176863
Bacteroidota
CAT
Met
>WENV170570912
FLOH01000037
298625
Bacteroidota
CAT
Met
>WENV170570879
FLOH01000032
284409
Bacteroidota
CAT
Met
>WENV170570877
FLOH01000032
295349
Bacteroidota
CCA
Trp
>WENV170572091
FLOH01000526
295349
Bacteroidota
CCA
Trp
>WENV170571421
FLOH01000158
320669
Bacteroidota
GAA
Phe
>WENV170570764
FLOH01000021
299032
Bacteroidota
GCC
Gly
>WENV170572656
FLOH01001126
74253
Bacteroidota
GCT
Ser
>WENV170570459
FLOH01000005
408604
Bacteroidota
GGT
Thr
>WENV170572691
FLOH01001165
193718
Bacteroidota
GTC
Asp
>WENV170573038
FLOH01004400
193718
Bacteroidota
GTC
Asp
>WENV170570450
FLOH01000005
179597
Bacteroidota
GTG
His
>WENV170570453
FLOH01000005
181598
Bacteroidota
GTT
Asn
>WENV170570911
FLOH01000037
181598
Bacteroidota
GTT
Asn
>WENV170571198
FLOH01000093
181598
Bacteroidota
GTT
Asn
>WENV170571070
FLOH01000063
156068
Bacteroidota
TAC
Val
>WENV170570918
FLOH01000038
157895
Bacteroidota
TAC
Val
>WENV170571829
FLOH01000330
162868
Bacteroidota
TAC
Val
>WENV170570915
FLOH01000037
117927
Bacteroidota
TAG
Leu
>WENV170572658
FLOH01001126
176707
Bacteroidota
TCT
Arg
>WENV170570467
FLOH01000005
184112
Bacteroidota
TCT
Arg
>WENV170570451
FLOH01000005
56162
Bacteroidota
TGA
Ser
>WENV170571618
FLOH01000232
155786
Bacteroidota
TGG
Pro
>WENV170572657
FLOH01001126
155786
Bacteroidota
TGG
Pro
>WENV170570463
FLOH01000005
155808
Bacteroidota
TGG
Pro
>WENV170570466
FLOH01000005
155808
Bacteroidota
TGG
Pro
>WENV170570456
FLOH01000005
177083
Bacteroidota
TGT
Thr
>WENV170570873
FLOH01000032
177083
Bacteroidota
TGT
Thr
>WENV170571619
FLOH01000232
177083
Bacteroidota
TGT
Thr
>WENV170572142
FLOH01000558
402390
Bacteroidota
TTC
Glu
>WENV170570464
FLOH01000005
399343
Bacteroidota
TTC
Glu
>WENV170572184
FLOH01000584
399343
Bacteroidota
TTC
Glu
>WENV170572046
FLOH01000495
416636
Bacteroidota
TTC
Glu
>WENV170572366
FLOH01000786
282712
Bacteroidota
TTT
Lys
>WENV170572266
FLOH01000675
282369
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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