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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180005159
FLRT01184606
481044
Bacteroidota
>WENV180004830
FLRT01000456
178572
Bacteroidota
CAT
Met
>WENV180005040
FLRT01076276
178572
Bacteroidota
CAT
Met
>WENV180004943
FLRT01014900
283316
Bacteroidota
CCA
Trp
>WENV180005118
FLRT01149165
312035
Bacteroidota
CCA
Trp
>WENV180004957
FLRT01018969
481045
Bacteroidota
CCC
Gly
>WENV180005043
FLRT01078775
400949
Bacteroidota
CCT
Arg
>WENV180004906
FLRT01004276
431429
Bacteroidota
CCT
Arg
>WENV180004925
FLRT01008124
404662
Bacteroidota
CCT
Arg
>WENV180004900
FLRT01002872
284236
Bacteroidota
CGG
Pro
>WENV180004956
FLRT01018969
283315
Bacteroidota
CGT
Thr
>WENV180004935
FLRT01010606
481267
Bacteroidota
CTG
Gln
>WENV180004990
FLRT01040713
20533
Bacteroidota
GGA
Ser
>WENV180005085
FLRT01107879
156128
Bacteroidota
GGG
Pro
>WENV180004832
FLRT01000482
400161
Bacteroidota
GGT
Thr
>WENV180004902
FLRT01003215
242241
Bacteroidota
GTC
Asp
>WENV180005052
FLRT01083399
178571
Bacteroidota
GTT
Asn
>WENV180004846
FLRT01000863
46648
Bacteroidota
TAA
Leu
>WENV180005161
FLRT01184777
118433
Bacteroidota
TAG
Leu
>WENV180004845
FLRT01000822
400815
Bacteroidota
TTC
Glu
>WENV180004945
FLRT01016574
282852
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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