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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
89 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180005779
FLRX01000049
284236
Bacteroidota
CGG
Pro
>WENV180005780
FLRX01000125
178572
Bacteroidota
CAT
Met
>WENV180005781
FLRX01000307
20533
Bacteroidota
GGA
Ser
>WENV180005782
FLRX01000337
312035
Bacteroidota
CCA
Trp
>WENV180005787
FLRX01000744
46648
Bacteroidota
TAA
Leu
>WENV180005792
FLRX01000867
283316
Bacteroidota
CCA
Trp
>WENV180005795
FLRX01000952
175944
Bacteroidota
CAT
Met
>WENV180005796
FLRX01000954
404109
Bacteroidota
CTC
Glu
>WENV180005799
FLRX01001112
431429
Bacteroidota
CCT
Arg
>WENV180005800
FLRX01001161
481328
Bacteroidota
TTG
Gln
>WENV180005801
FLRX01001170
283315
Bacteroidota
CGT
Thr
>WENV180005813
FLRX01001627
118432
Bacteroidota
CAG
Leu
>WENV180005814
FLRX01001627
73509
Bacteroidota
GAG
Leu
>WENV180005816
FLRX01001666
481045
Bacteroidota
CCC
Gly
>WENV180005819
FLRX01001691
284237
Bacteroidota
TTT
Lys
>WENV180005820
FLRX01001970
178571
Bacteroidota
GTT
Asn
>WENV180005826
FLRX01002670
46648
Bacteroidota
TAA
Leu
>WENV180005829
FLRX01003735
178571
Bacteroidota
GTT
Asn
>WENV180005834
FLRX01005423
118220
Bacteroidota
GTA
Tyr
>WENV180005835
FLRX01005610
282852
Bacteroidota
TTT
Lys
>WENV180005838
FLRX01006169
118220
Bacteroidota
GTA
Tyr
>WENV180005842
FLRX01007302
282852
Bacteroidota
TTT
Lys
>WENV180005843
FLRX01007746
178571
Bacteroidota
GTT
Asn
>WENV180005845
FLRX01007819
481267
Bacteroidota
CTG
Gln
>WENV180005846
FLRX01008093
404661
Bacteroidota
GTG
His
>WENV180005850
FLRX01008836
179653
Bacteroidota
GTG
His
>WENV180005851
FLRX01009006
178572
Bacteroidota
CAT
Met
>WENV180005853
FLRX01010094
331443
Bacteroidota
CGT
Thr
>WENV180005855
FLRX01010230
185159
Bacteroidota
TCT
Arg
>WENV180005856
FLRX01010838
400949
Bacteroidota
CCT
Arg
>WENV180005857
FLRX01011097
284457
Bacteroidota
CAT
Met
>WENV180005863
FLRX01013432
178571
Bacteroidota
GTT
Asn
>WENV180005864
FLRX01013594
481044
Bacteroidota
>WENV180005868
FLRX01014132
481329
Bacteroidota
>WENV180005869
FLRX01014346
284456
Bacteroidota
CGG
Pro
>WENV180005876
FLRX01015452
481328
Bacteroidota
TTG
Gln
>WENV180005886
FLRX01019659
21008
Bacteroidota
GGA
Ser
>WENV180005887
FLRX01020275
431429
Bacteroidota
CCT
Arg
>WENV180005888
FLRX01021171
400815
Bacteroidota
TTC
Glu
>WENV180005896
FLRX01023624
118220
Bacteroidota
GTA
Tyr
>WENV180005900
FLRX01026713
187814
Bacteroidota
GTC
Asp
>WENV180005901
FLRX01026713
187814
Bacteroidota
GTC
Asp
>WENV180005903
FLRX01027107
178572
Bacteroidota
CAT
Met
>WENV180005904
FLRX01027253
228499
Bacteroidota
GTG
His
>WENV180005907
FLRX01028397
46648
Bacteroidota
TAA
Leu
>WENV180005913
FLRX01029448
46648
Bacteroidota
TAA
Leu
>WENV180005916
FLRX01030312
187814
Bacteroidota
GTC
Asp
>WENV180005917
FLRX01030312
187814
Bacteroidota
GTC
Asp
>WENV180005918
FLRX01030563
431429
Bacteroidota
CCT
Arg
>WENV180005923
FLRX01033304
157146
Bacteroidota
TAC
Val
>WENV180005924
FLRX01033373
187814
Bacteroidota
GTC
Asp
>WENV180005925
FLRX01033373
187814
Bacteroidota
GTC
Asp
>WENV180005926
FLRX01033373
187814
Bacteroidota
GTC
Asp
>WENV180005927
FLRX01034593
280478
Bacteroidota
GCC
Gly
>WENV180005928
FLRX01034724
118379
Bacteroidota
TAG
Leu
>WENV180005929
FLRX01034930
481045
Bacteroidota
CCC
Gly
>WENV180005938
FLRX01040044
20533
Bacteroidota
GGA
Ser
>WENV180005941
FLRX01041029
312035
Bacteroidota
CCA
Trp
>WENV180005950
FLRX01052407
158068
Bacteroidota
GGG
Pro
>WENV180005953
FLRX01055063
284236
Bacteroidota
CGG
Pro
>WENV180005954
FLRX01055499
178572
Bacteroidota
CAT
Met
>WENV180005972
FLRX01069330
481329
Bacteroidota
>WENV180005976
FLRX01070669
178571
Bacteroidota
GTT
Asn
>WENV180005994
FLRX01081355
282852
Bacteroidota
TTT
Lys
>WENV180006004
FLRX01083946
482908
Bacteroidota
GCA
Cys
>WENV180006011
FLRX01090542
187814
Bacteroidota
GTC
Asp
>WENV180006012
FLRX01090575
156128
Bacteroidota
GGG
Pro
>WENV180006017
FLRX01091873
481044
Bacteroidota
>WENV180006022
FLRX01093603
75001
Bacteroidota
CAA
Leu
>WENV180006023
FLRX01093903
284457
Bacteroidota
CAT
Met
>WENV180006047
FLRX01110044
491385
Bacteroidota
TTG
Gln
>WENV180006052
FLRX01115437
187814
Bacteroidota
GTC
Asp
>WENV180006080
FLRX01136076
178572
Bacteroidota
CAT
Met
>WENV180006083
FLRX01140203
185161
Bacteroidota
GTT
Asn
>WENV180006091
FLRX01148186
118433
Bacteroidota
TAG
Leu
>WENV180006101
FLRX01155418
179653
Bacteroidota
GTG
His
>WENV180006104
FLRX01156526
118220
Bacteroidota
GTA
Tyr
>WENV180006116
FLRX01173392
481045
Bacteroidota
CCC
Gly
>WENV180006120
FLRX01177363
284457
Bacteroidota
CAT
Met
>WENV180006122
FLRX01179849
284456
Bacteroidota
CGG
Pro
>WENV180006155
FLRX01215659
156383
Bacteroidota
GGG
Pro
>WENV180006159
FLRX01219054
416636
Bacteroidota
TTC
Glu
>WENV180006160
FLRX01219109
118433
Bacteroidota
TAG
Leu
>WENV180006176
FLRX01230930
290466
Bacteroidota
CCA
Trp
>WENV180006184
FLRX01237140
283315
Bacteroidota
CGT
Thr
>WENV180006201
FLRX01250726
400949
Bacteroidota
CCT
Arg
>WENV180006204
FLRX01255839
46648
Bacteroidota
TAA
Leu
>WENV180006206
FLRX01255907
400949
Bacteroidota
CCT
Arg
>WENV180006207
FLRX01255912
178134
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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