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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180007347
FLSA01003148
75001
Bacteroidota
CAA
Leu
>WENV180007663
FLSA01165790
118432
Bacteroidota
CAG
Leu
>WENV180007741
FLSA01244954
178572
Bacteroidota
CAT
Met
>WENV180007343
FLSA01002434
290466
Bacteroidota
CCA
Trp
>WENV180007361
FLSA01005227
400949
Bacteroidota
CCT
Arg
>WENV180007715
FLSA01216640
284456
Bacteroidota
CGG
Pro
>WENV180007370
FLSA01006913
404109
Bacteroidota
CTC
Glu
>WENV180007487
FLSA01038034
290468
Bacteroidota
CTT
Lys
>WENV180007664
FLSA01165790
73509
Bacteroidota
GAG
Leu
>WENV180007506
FLSA01048573
178133
Bacteroidota
GAT
Ile
>WENV180007444
FLSA01026476
280478
Bacteroidota
GCC
Gly
>WENV180007643
FLSA01139910
30780
Bacteroidota
GCT
Ser
>WENV180007426
FLSA01020546
21008
Bacteroidota
GGA
Ser
>WENV180007378
FLSA01011145
158068
Bacteroidota
GGG
Pro
>WENV180007399
FLSA01013118
404663
Bacteroidota
GGT
Thr
>WENV180007609
FLSA01116841
404663
Bacteroidota
GGT
Thr
>WENV180007642
FLSA01139771
404661
Bacteroidota
GTG
His
>WENV180007371
FLSA01007086
178571
Bacteroidota
GTT
Asn
>WENV180007625
FLSA01128862
178571
Bacteroidota
GTT
Asn
>WENV180007719
FLSA01220739
178571
Bacteroidota
GTT
Asn
>WENV180007565
FLSA01079490
46648
Bacteroidota
TAA
Leu
>WENV180007422
FLSA01019631
156422
Bacteroidota
TAC
Val
>WENV180007445
FLSA01026500
156422
Bacteroidota
TAC
Val
>WENV180007647
FLSA01149809
119584
Bacteroidota
TAG
Leu
>WENV180007363
FLSA01005752
56385
Bacteroidota
TGA
Ser
>WENV180007613
FLSA01119481
398871
Bacteroidota
TTC
Glu
>WENV180007499
FLSA01046905
482909
Bacteroidota
TTG
Gln
>WENV180007689
FLSA01188301
290467
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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