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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181348038
OFMN01000037
172207
Bacteroidota
GGG
Pro
>WENV181348094
OFMN01000073
484496
Bacteroidota
TTG
Gln
>WENV181348131
OFMN01000108
172207
Bacteroidota
GGG
Pro
>WENV181348130
OFMN01000108
488746
Bacteroidota
CTG
Gln
>WENV181348135
OFMN01000115
280451
Bacteroidota
CGT
Thr
>WENV181348147
OFMN01000126
27502
Bacteroidota
GGA
Ser
>WENV181348181
OFMN01000162
365112
Bacteroidota
TTT
Lys
>WENV181348191
OFMN01000170
175903
Bacteroidota
GTG
His
>WENV181348208
OFMN01000186
280557
Bacteroidota
CAT
Met
>WENV181348252
OFMN01000235
398836
Bacteroidota
GCA
Cys
>WENV181348264
OFMN01000249
56385
Bacteroidota
TGA
Ser
>WENV181348274
OFMN01000264
156128
Bacteroidota
GGG
Pro
>WENV181348283
OFMN01000290
404109
Bacteroidota
CTC
Glu
>WENV181348287
OFMN01000303
398828
Bacteroidota
CCG
Arg
>WENV181348330
OFMN01000370
172085
Bacteroidota
TAC
Val
>WENV181348329
OFMN01000370
178134
Bacteroidota
TGG
Pro
>WENV181348354
OFMN01000460
117741
Bacteroidota
TAG
Leu
>WENV181348361
OFMN01000472
280446
Bacteroidota
TTT
Lys
>WENV181348379
OFMN01000515
187400
Bacteroidota
GTT
Asn
>WENV181348393
OFMN01000552
178571
Bacteroidota
GTT
Asn
>WENV181348436
OFMN01000670
289031
Bacteroidota
CAT
Met
>WENV181348441
OFMN01000682
398829
Bacteroidota
CCT
Arg
>WENV181348451
OFMN01000697
186874
Bacteroidota
CAT
Met
>WENV181348462
OFMN01000718
400161
Bacteroidota
GGT
Thr
>WENV181348501
OFMN01000879
20206
Bacteroidota
GGA
Ser
>WENV181348529
OFMN01001010
201819
Bacteroidota
CAT
Met
>WENV181348565
OFMN01001166
280446
Bacteroidota
TTT
Lys
>WENV181348654
OFMN01001755
283315
Bacteroidota
CGT
Thr
>WENV181348729
OFMN01002485
27502
Bacteroidota
GGA
Ser
>WENV181348734
OFMN01002524
481044
Bacteroidota
>WENV181348754
OFMN01002706
172085
Bacteroidota
TAC
Val
>WENV181348830
OFMN01003610
280478
Bacteroidota
GCC
Gly
>WENV181348890
OFMN01004855
175902
Bacteroidota
GGC
Ala
>WENV181348906
OFMN01005349
404109
Bacteroidota
CTC
Glu
>WENV181348950
OFMN01006399
365112
Bacteroidota
TTT
Lys
>WENV181348954
OFMN01006577
69204
Bacteroidota
TGA
Ser
>WENV181348956
OFMN01006672
483416
Bacteroidota
CTG
Gln
>WENV181348995
OFMN01008364
418894
Bacteroidota
TTC
Glu
>WENV181349002
OFMN01008806
29791
Bacteroidota
GCT
Ser
>WENV181349003
OFMN01008806
398860
Bacteroidota
CTC
Glu
>WENV181349076
OFMN01011911
118089
Bacteroidota
TAG
Leu
>WENV181349108
OFMN01014782
282712
Bacteroidota
TTT
Lys
>WENV181349118
OFMN01016268
175844
Bacteroidota
GGC
Ala
>WENV181349342
OFMN01058203
20449
Bacteroidota
GGA
Ser
>WENV181349355
OFMN01063881
21127
Bacteroidota
GGA
Ser
>WENV181349366
OFMN01067775
399200
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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