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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182162607
OHMH01004285
295385
Bacteroidota
CCA
Trp
>WENV182162250
OHMH01000075
117741
Bacteroidota
TAG
Leu
>WENV182162175
OHMH01000002
398829
Bacteroidota
CCT
Arg
>WENV182162174
OHMH01000002
175838
Bacteroidota
GTT
Asn
>WENV182162429
OHMH01000744
400161
Bacteroidota
GGT
Thr
>WENV182162328
OHMH01000234
280557
Bacteroidota
CAT
Met
>WENV182162199
OHMH01000012
20206
Bacteroidota
GGA
Ser
>WENV182162211
OHMH01000018
175903
Bacteroidota
GTG
His
>WENV182162362
OHMH01000357
178571
Bacteroidota
GTT
Asn
>WENV182162552
OHMH01001905
156406
Bacteroidota
TAC
Val
>WENV182162619
OHMH01005019
56385
Bacteroidota
TGA
Ser
>WENV182162620
OHMH01005229
178133
Bacteroidota
GAT
Ile
>WENV182162177
OHMH01000002
56072
Bacteroidota
TAA
Leu
>WENV182162184
OHMH01000006
57807
Bacteroidota
TGA
Ser
>WENV182162217
OHMH01000026
57807
Bacteroidota
TGA
Ser
>WENV182162189
OHMH01000008
175902
Bacteroidota
GGC
Ala
>WENV182162674
OHMH01011472
283315
Bacteroidota
CGT
Thr
>WENV182162649
OHMH01007916
480404
Bacteroidota
TTG
Gln
>WENV182162569
OHMH01002542
156128
Bacteroidota
GGG
Pro
>WENV182162179
OHMH01000003
280451
Bacteroidota
CGT
Thr
>WENV182162226
OHMH01000036
99847
Bacteroidota
GTA
Tyr
>WENV182162426
OHMH01000733
99847
Bacteroidota
GTA
Tyr
>WENV182162463
OHMH01000973
404109
Bacteroidota
CTC
Glu
>WENV182162464
OHMH01000973
404109
Bacteroidota
CTC
Glu
>WENV182162685
OHMH01012657
175844
Bacteroidota
GGC
Ala
>WENV182162511
OHMH01001314
187814
Bacteroidota
GTC
Asp
>WENV182162550
OHMH01001830
178134
Bacteroidota
TGG
Pro
>WENV182162428
OHMH01000744
118220
Bacteroidota
GTA
Tyr
>WENV182162178
OHMH01000003
398828
Bacteroidota
CCG
Arg
>WENV182162577
OHMH01002874
481044
Bacteroidota
>WENV182162287
OHMH01000143
484496
Bacteroidota
TTG
Gln
>WENV182162239
OHMH01000052
398836
Bacteroidota
GCA
Cys
>WENV182162488
OHMH01001093
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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