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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183442894
OMCM01003536
280532
Bacteroidota
>WENV183442312
OMCM01000027
289031
Bacteroidota
CAT
Met
>WENV183442403
OMCM01000122
280557
Bacteroidota
CAT
Met
>WENV183442400
OMCM01000113
201819
Bacteroidota
CAT
Met
>WENV183442746
OMCM01001354
175936
Bacteroidota
CAT
Met
>WENV183442402
OMCM01000115
186874
Bacteroidota
CAT
Met
>WENV183443014
OMCM01008057
186874
Bacteroidota
CAT
Met
>WENV183442864
OMCM01002959
180199
Bacteroidota
CAT
Met
>WENV183442434
OMCM01000155
280515
Bacteroidota
CCA
Trp
>WENV183442370
OMCM01000086
398828
Bacteroidota
CCG
Arg
>WENV183442916
OMCM01003860
398829
Bacteroidota
CCT
Arg
>WENV183442824
OMCM01002242
399026
Bacteroidota
CCT
Arg
>WENV183442355
OMCM01000075
280451
Bacteroidota
CGT
Thr
>WENV183442468
OMCM01000205
398860
Bacteroidota
CTC
Glu
>WENV183442630
OMCM01000695
483416
Bacteroidota
CTG
Gln
>WENV183443019
OMCM01008137
483416
Bacteroidota
CTG
Gln
>WENV183442327
OMCM01000043
488746
Bacteroidota
CTG
Gln
>WENV183443136
OMCM01015952
480318
Bacteroidota
CTG
Gln
>WENV183442286
OMCM01000013
398836
Bacteroidota
GCA
Cys
>WENV183442343
OMCM01000058
398836
Bacteroidota
GCA
Cys
>WENV183442905
OMCM01003661
398836
Bacteroidota
GCA
Cys
>WENV183442487
OMCM01000249
20492
Bacteroidota
GGA
Ser
>WENV183442328
OMCM01000043
20206
Bacteroidota
GGA
Ser
>WENV183442639
OMCM01000763
21127
Bacteroidota
GGA
Ser
>WENV183442390
OMCM01000107
20766
Bacteroidota
GGA
Ser
>WENV183442591
OMCM01000549
175886
Bacteroidota
GGC
Ala
>WENV183442314
OMCM01000028
175902
Bacteroidota
GGC
Ala
>WENV183443157
OMCM01018295
183889
Bacteroidota
GGC
Ala
>WENV183442387
OMCM01000100
158068
Bacteroidota
GGG
Pro
>WENV183442818
OMCM01002147
158068
Bacteroidota
GGG
Pro
>WENV183442757
OMCM01001474
405877
Bacteroidota
GGT
Thr
>WENV183442282
OMCM01000010
99847
Bacteroidota
GTA
Tyr
>WENV183442558
OMCM01000416
215303
Bacteroidota
GTC
Asp
>WENV183442270
OMCM01000006
175903
Bacteroidota
GTG
His
>WENV183442352
OMCM01000073
175838
Bacteroidota
GTT
Asn
>WENV183442772
OMCM01001593
182267
Bacteroidota
GTT
Asn
>WENV183442773
OMCM01001593
182267
Bacteroidota
GTT
Asn
>WENV183442354
OMCM01000073
56072
Bacteroidota
TAA
Leu
>WENV183442560
OMCM01000427
159415
Bacteroidota
TAC
Val
>WENV183442561
OMCM01000427
159415
Bacteroidota
TAC
Val
>WENV183442544
OMCM01000371
117741
Bacteroidota
TAG
Leu
>WENV183442439
OMCM01000161
176192
Bacteroidota
TCT
Arg
>WENV183442389
OMCM01000107
56493
Bacteroidota
TGA
Ser
>WENV183442484
OMCM01000246
57807
Bacteroidota
TGA
Ser
>WENV183442768
OMCM01001541
57807
Bacteroidota
TGA
Ser
>WENV183442814
OMCM01002116
57807
Bacteroidota
TGA
Ser
>WENV183442497
OMCM01000282
179697
Bacteroidota
TGT
Thr
>WENV183442944
OMCM01004631
418894
Bacteroidota
TTC
Glu
>WENV183442543
OMCM01000367
484496
Bacteroidota
TTG
Gln
>WENV183442689
OMCM01001012
484496
Bacteroidota
TTG
Gln
>WENV183442470
OMCM01000217
285360
Bacteroidota
TTT
Lys
>WENV183442608
OMCM01000605
285360
Bacteroidota
TTT
Lys
>WENV183442742
OMCM01001301
332896
Bacteroidota
TTT
Lys
>WENV183442280
OMCM01000010
280446
Bacteroidota
TTT
Lys
>WENV183442290
OMCM01000015
280446
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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