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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183451023
OMDB01000001
400161
Bacteroidota
GGT
Thr
>WENV183451024
OMDB01000001
312035
Bacteroidota
CCA
Trp
>WENV183451025
OMDB01000001
175944
Bacteroidota
CAT
Met
>WENV183451064
OMDB01000021
398828
Bacteroidota
CCG
Arg
>WENV183451068
OMDB01000029
118221
Bacteroidota
CAA
Leu
>WENV183451086
OMDB01000055
182267
Bacteroidota
GTT
Asn
>WENV183451085
OMDB01000055
56072
Bacteroidota
TAA
Leu
>WENV183451105
OMDB01000088
398836
Bacteroidota
GCA
Cys
>WENV183451106
OMDB01000088
398836
Bacteroidota
GCA
Cys
>WENV183451121
OMDB01000102
46648
Bacteroidota
TAA
Leu
>WENV183451130
OMDB01000118
27502
Bacteroidota
GGA
Ser
>WENV183451134
OMDB01000129
280451
Bacteroidota
CGT
Thr
>WENV183451136
OMDB01000133
56385
Bacteroidota
TGA
Ser
>WENV183451176
OMDB01000253
174201
Bacteroidota
GGG
Pro
>WENV183451182
OMDB01000271
172085
Bacteroidota
TAC
Val
>WENV183451184
OMDB01000281
99847
Bacteroidota
GTA
Tyr
>WENV183451186
OMDB01000291
69204
Bacteroidota
TGA
Ser
>WENV183451189
OMDB01000300
398836
Bacteroidota
GCA
Cys
>WENV183451194
OMDB01000329
174201
Bacteroidota
GGG
Pro
>WENV183451207
OMDB01000394
20206
Bacteroidota
GGA
Ser
>WENV183451212
OMDB01000433
69204
Bacteroidota
TGA
Ser
>WENV183451218
OMDB01000487
488746
Bacteroidota
CTG
Gln
>WENV183451219
OMDB01000499
56493
Bacteroidota
TGA
Ser
>WENV183451220
OMDB01000503
365112
Bacteroidota
TTT
Lys
>WENV183451225
OMDB01000526
404109
Bacteroidota
CTC
Glu
>WENV183451243
OMDB01000688
280557
Bacteroidota
CAT
Met
>WENV183451246
OMDB01000709
175902
Bacteroidota
GGC
Ala
>WENV183451250
OMDB01000735
481328
Bacteroidota
TTG
Gln
>WENV183451279
OMDB01000976
398829
Bacteroidota
CCT
Arg
>WENV183451303
OMDB01001394
174201
Bacteroidota
GGG
Pro
>WENV183451317
OMDB01001608
20449
Bacteroidota
GGA
Ser
>WENV183451318
OMDB01001648
175903
Bacteroidota
GTG
His
>WENV183451328
OMDB01001832
99847
Bacteroidota
GTA
Tyr
>WENV183451335
OMDB01001916
242241
Bacteroidota
GTC
Asp
>WENV183451337
OMDB01001968
280478
Bacteroidota
GCC
Gly
>WENV183451349
OMDB01002206
484496
Bacteroidota
TTG
Gln
>WENV183451365
OMDB01002626
365112
Bacteroidota
TTT
Lys
>WENV183451368
OMDB01002654
418894
Bacteroidota
TTC
Glu
>WENV183451370
OMDB01002692
175908
Bacteroidota
GTC
Asp
>WENV183451406
OMDB01003910
399200
Bacteroidota
CAT
Met
>WENV183451443
OMDB01006038
186143
Bacteroidota
TGC
Ala
>WENV183451444
OMDB01006125
280553
Bacteroidota
TTT
Lys
>WENV183451449
OMDB01006500
176192
Bacteroidota
TCT
Arg
>WENV183451452
OMDB01006667
118089
Bacteroidota
TAG
Leu
>WENV183451462
OMDB01007984
285750
Bacteroidota
CCC
Gly
>WENV183451463
OMDB01008094
178907
Bacteroidota
TCT
Arg
>WENV183451562
OMDB01023918
74084
Bacteroidota
CAG
Leu
>WENV183451640
OMDB01044710
398871
Bacteroidota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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