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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183468413
OMEH01000005
398829
Bacteroidota
CCT
Arg
>WENV183468412
OMEH01000005
56072
Bacteroidota
TAA
Leu
>WENV183468414
OMEH01000010
280446
Bacteroidota
TTT
Lys
>WENV183468421
OMEH01000018
175902
Bacteroidota
GGC
Ala
>WENV183468423
OMEH01000019
99847
Bacteroidota
GTA
Tyr
>WENV183468426
OMEH01000022
280557
Bacteroidota
CAT
Met
>WENV183468435
OMEH01000045
398836
Bacteroidota
GCA
Cys
>WENV183468449
OMEH01000065
56493
Bacteroidota
TGA
Ser
>WENV183468450
OMEH01000065
175903
Bacteroidota
GTG
His
>WENV183468463
OMEH01000113
398836
Bacteroidota
GCA
Cys
>WENV183468464
OMEH01000132
20492
Bacteroidota
GGA
Ser
>WENV183468483
OMEH01000276
20206
Bacteroidota
GGA
Ser
>WENV183468486
OMEH01000290
280451
Bacteroidota
CGT
Thr
>WENV183468493
OMEH01000335
484496
Bacteroidota
TTG
Gln
>WENV183468502
OMEH01000415
405877
Bacteroidota
GGT
Thr
>WENV183468505
OMEH01000444
56493
Bacteroidota
TGA
Ser
>WENV183468509
OMEH01000478
480404
Bacteroidota
TTG
Gln
>WENV183468520
OMEH01000517
156406
Bacteroidota
TAC
Val
>WENV183468521
OMEH01000520
57807
Bacteroidota
TGA
Ser
>WENV183468524
OMEH01000538
483416
Bacteroidota
CTG
Gln
>WENV183468537
OMEH01000660
289031
Bacteroidota
CAT
Met
>WENV183468545
OMEH01000695
398828
Bacteroidota
CCG
Arg
>WENV183468556
OMEH01000802
21127
Bacteroidota
GGA
Ser
>WENV183468593
OMEH01001021
99847
Bacteroidota
GTA
Tyr
>WENV183468595
OMEH01001058
484496
Bacteroidota
TTG
Gln
>WENV183468599
OMEH01001154
295385
Bacteroidota
CCA
Trp
>WENV183468624
OMEH01001493
480318
Bacteroidota
CTG
Gln
>WENV183468631
OMEH01001595
176192
Bacteroidota
TCT
Arg
>WENV183468632
OMEH01001623
399200
Bacteroidota
CAT
Met
>WENV183468645
OMEH01001861
29791
Bacteroidota
GCT
Ser
>WENV183468663
OMEH01002293
57807
Bacteroidota
TGA
Ser
>WENV183468679
OMEH01003038
186874
Bacteroidota
CAT
Met
>WENV183468686
OMEH01003208
179697
Bacteroidota
TGT
Thr
>WENV183468697
OMEH01003435
20449
Bacteroidota
GGA
Ser
>WENV183468737
OMEH01005310
280478
Bacteroidota
GCC
Gly
>WENV183468738
OMEH01005310
74084
Bacteroidota
CAG
Leu
>WENV183468749
OMEH01006223
398836
Bacteroidota
GCA
Cys
>WENV183468755
OMEH01006773
175886
Bacteroidota
GGC
Ala
>WENV183468798
OMEH01010206
73011
Bacteroidota
CAA
Leu
>WENV183468809
OMEH01011591
175936
Bacteroidota
CAT
Met
>WENV183468810
OMEH01011761
280530
Bacteroidota
CCA
Trp
>WENV183468812
OMEH01011933
404226
Bacteroidota
CCT
Arg
>WENV183468836
OMEH01015165
117804
Bacteroidota
TAG
Leu
>WENV183468840
OMEH01015802
398871
Bacteroidota
TTC
Glu
>WENV183468874
OMEH01020332
280515
Bacteroidota
CCA
Trp
>WENV183468886
OMEH01022769
118089
Bacteroidota
TAG
Leu
>WENV183468902
OMEH01027007
175844
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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