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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183509152
OMHG01009284
57660
Bacteroidota
TGA
Ser
>WENV183509057
OMHG01003607
482909
Bacteroidota
TTG
Gln
>WENV183509129
OMHG01007360
287319
Bacteroidota
TTT
Lys
>WENV183509114
OMHG01005910
157400
Bacteroidota
TAC
Val
>WENV183509149
OMHG01008753
57645
Bacteroidota
TGA
Ser
>WENV183509172
OMHG01010691
187628
Bacteroidota
TCT
Arg
>WENV183509156
OMHG01009515
180199
Bacteroidota
CAT
Met
>WENV183509028
OMHG01002683
147999
Bacteroidota
CAA
Leu
>WENV183509015
OMHG01002011
179822
Bacteroidota
TGC
Ala
>WENV183509124
OMHG01006992
187400
Bacteroidota
GTT
Asn
>WENV183509018
OMHG01002073
21008
Bacteroidota
GGA
Ser
>WENV183509169
OMHG01010072
285750
Bacteroidota
CCC
Gly
>WENV183509131
OMHG01007360
75391
Bacteroidota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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