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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183510515
OMHO01008112
192166
Bacteroidota
GTT
Asn
>WENV183510518
OMHO01008250
222068
Bacteroidota
GAT
Ile
>WENV183510396
OMHO01000624
348707
Bacteroidota
TTT
Lys
>WENV183510419
OMHO01000972
157400
Bacteroidota
TAC
Val
>WENV183510418
OMHO01000959
320669
Bacteroidota
GAA
Phe
>WENV183510395
OMHO01000591
187358
Bacteroidota
GTG
His
>WENV183510486
OMHO01004889
483469
Bacteroidota
TTG
Gln
>WENV183510385
OMHO01000272
187628
Bacteroidota
TCT
Arg
>WENV183510410
OMHO01000736
147999
Bacteroidota
CAA
Leu
>WENV183510519
OMHO01008250
179822
Bacteroidota
TGC
Ala
>WENV183510383
OMHO01000272
87360
Bacteroidota
GCT
Ser
>WENV183510477
OMHO01004282
307577
Bacteroidota
>WENV183510398
OMHO01000624
75391
Bacteroidota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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