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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183522355
OMOM01008378
191838
Bacteroidota
CAT
Met
>WENV183522060
OMOM01000027
176863
Bacteroidota
CAT
Met
>WENV183522101
OMOM01000077
198599
Bacteroidota
GTG
His
>WENV183522370
OMOM01010066
281538
Bacteroidota
GAA
Phe
>WENV183522073
OMOM01000044
120026
Bacteroidota
GTA
Tyr
>WENV183522136
OMOM01000166
156605
Bacteroidota
GAC
Val
>WENV183522046
OMOM01000009
156756
Bacteroidota
TGG
Pro
>WENV183522135
OMOM01000166
157796
Bacteroidota
TAC
Val
>WENV183522112
OMOM01000119
303411
Bacteroidota
>WENV183522114
OMOM01000125
282369
Bacteroidota
TTT
Lys
>WENV183522066
OMOM01000037
291910
Bacteroidota
TTG
Gln
>WENV183522072
OMOM01000044
177083
Bacteroidota
TGT
Thr
>WENV183522167
OMOM01000377
298625
Bacteroidota
CAT
Met
>WENV183522129
OMOM01000151
176862
Bacteroidota
GGC
Ala
>WENV183522085
OMOM01000054
181598
Bacteroidota
GTT
Asn
>WENV183522108
OMOM01000100
296664
Bacteroidota
GAA
Phe
>WENV183522075
OMOM01000044
408604
Bacteroidota
GGT
Thr
>WENV183522180
OMOM01000475
399343
Bacteroidota
TTC
Glu
>WENV183522067
OMOM01000038
56162
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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