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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183530967
OOAC01000024
280478
Bacteroidota
GCC
Gly
>WENV183530995
OOAC01000038
118089
Bacteroidota
TAG
Leu
>WENV183531001
OOAC01000043
158068
Bacteroidota
GGG
Pro
>WENV183531002
OOAC01000043
280446
Bacteroidota
TTT
Lys
>WENV183531010
OOAC01000049
418894
Bacteroidota
TTC
Glu
>WENV183531011
OOAC01000053
285750
Bacteroidota
CCC
Gly
>WENV183531012
OOAC01000054
398836
Bacteroidota
GCA
Cys
>WENV183531044
OOAC01000068
280515
Bacteroidota
CCA
Trp
>WENV183531089
OOAC01000104
182267
Bacteroidota
GTT
Asn
>WENV183531096
OOAC01000113
20449
Bacteroidota
GGA
Ser
>WENV183531103
OOAC01000126
483416
Bacteroidota
CTG
Gln
>WENV183531118
OOAC01000147
176192
Bacteroidota
TCT
Arg
>WENV183531149
OOAC01000189
57807
Bacteroidota
TGA
Ser
>WENV183531166
OOAC01000208
201819
Bacteroidota
CAT
Met
>WENV183531168
OOAC01000218
280478
Bacteroidota
GCC
Gly
>WENV183531170
OOAC01000218
280478
Bacteroidota
GCC
Gly
>WENV183531218
OOAC01000304
99847
Bacteroidota
GTA
Tyr
>WENV183531239
OOAC01000370
175886
Bacteroidota
GGC
Ala
>WENV183531288
OOAC01000524
56493
Bacteroidota
TGA
Ser
>WENV183531314
OOAC01000612
289031
Bacteroidota
CAT
Met
>WENV183531329
OOAC01000689
280557
Bacteroidota
CAT
Met
>WENV183531341
OOAC01000716
175902
Bacteroidota
GGC
Ala
>WENV183531408
OOAC01001001
186874
Bacteroidota
CAT
Met
>WENV183531445
OOAC01001127
203954
Bacteroidota
GTC
Asp
>WENV183531450
OOAC01001140
400088
Bacteroidota
GGT
Thr
>WENV183531455
OOAC01001165
179697
Bacteroidota
TGT
Thr
>WENV183531476
OOAC01001291
399200
Bacteroidota
CAT
Met
>WENV183531513
OOAC01001562
398829
Bacteroidota
CCT
Arg
>WENV183531584
OOAC01002117
398828
Bacteroidota
CCG
Arg
>WENV183531643
OOAC01002756
488746
Bacteroidota
CTG
Gln
>WENV183531654
OOAC01002936
20206
Bacteroidota
GGA
Ser
>WENV183531657
OOAC01002953
175904
Bacteroidota
CGG
Pro
>WENV183531741
OOAC01004830
158068
Bacteroidota
GGG
Pro
>WENV183531756
OOAC01005041
280451
Bacteroidota
CGT
Thr
>WENV183531783
OOAC01005859
175903
Bacteroidota
GTG
His
>WENV183531787
OOAC01005958
398836
Bacteroidota
GCA
Cys
>WENV183531826
OOAC01007239
175838
Bacteroidota
GTT
Asn
>WENV183531855
OOAC01008004
117741
Bacteroidota
TAG
Leu
>WENV183531878
OOAC01009291
484496
Bacteroidota
TTG
Gln
>WENV183531896
OOAC01011112
175902
Bacteroidota
GGC
Ala
>WENV183531920
OOAC01013049
158068
Bacteroidota
GGG
Pro
>WENV183531937
OOAC01014307
29791
Bacteroidota
GCT
Ser
>WENV183531938
OOAC01014307
398860
Bacteroidota
CTC
Glu
>WENV183532078
OOAC01034854
186142
Bacteroidota
GAT
Ile
>WENV183532079
OOAC01034854
186143
Bacteroidota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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