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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
101 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183544445
OOAO01003257
291612
Bacteroidota
>WENV183544382
OOAO01002566
280532
Bacteroidota
>WENV183543982
OOAO01000496
73011
Bacteroidota
CAA
Leu
>WENV183543940
OOAO01000377
74084
Bacteroidota
CAG
Leu
>WENV183543693
OOAO01000067
289031
Bacteroidota
CAT
Met
>WENV183544070
OOAO01000698
289031
Bacteroidota
CAT
Met
>WENV183543706
OOAO01000075
280557
Bacteroidota
CAT
Met
>WENV183543707
OOAO01000075
280557
Bacteroidota
CAT
Met
>WENV183543986
OOAO01000505
280557
Bacteroidota
CAT
Met
>WENV183544277
OOAO01001616
280557
Bacteroidota
CAT
Met
>WENV183543647
OOAO01000026
201819
Bacteroidota
CAT
Met
>WENV183544327
OOAO01002123
175936
Bacteroidota
CAT
Met
>WENV183544465
OOAO01003484
175936
Bacteroidota
CAT
Met
>WENV183544198
OOAO01001201
399200
Bacteroidota
CAT
Met
>WENV183544302
OOAO01001903
399200
Bacteroidota
CAT
Met
>WENV183544275
OOAO01001604
186874
Bacteroidota
CAT
Met
>WENV183543938
OOAO01000373
295385
Bacteroidota
CCA
Trp
>WENV183544472
OOAO01003555
280530
Bacteroidota
CCA
Trp
>WENV183544147
OOAO01000966
285750
Bacteroidota
CCC
Gly
>WENV183544046
OOAO01000616
398828
Bacteroidota
CCG
Arg
>WENV183543903
OOAO01000301
398829
Bacteroidota
CCT
Arg
>WENV183544369
OOAO01002467
175904
Bacteroidota
CGG
Pro
>WENV183543781
OOAO01000129
351598
Bacteroidota
CGG
Pro
>WENV183543787
OOAO01000135
351598
Bacteroidota
CGG
Pro
>WENV183543886
OOAO01000261
351598
Bacteroidota
CGG
Pro
>WENV183544123
OOAO01000888
351598
Bacteroidota
CGG
Pro
>WENV183544189
OOAO01001139
351598
Bacteroidota
CGG
Pro
>WENV183544229
OOAO01001359
351598
Bacteroidota
CGG
Pro
>WENV183544243
OOAO01001438
351598
Bacteroidota
CGG
Pro
>WENV183543766
OOAO01000114
280451
Bacteroidota
CGT
Thr
>WENV183544127
OOAO01000910
483416
Bacteroidota
CTG
Gln
>WENV183543682
OOAO01000055
488746
Bacteroidota
CTG
Gln
>WENV183544351
OOAO01002305
480318
Bacteroidota
CTG
Gln
>WENV183544378
OOAO01002534
480318
Bacteroidota
CTG
Gln
>WENV183544053
OOAO01000650
480325
Bacteroidota
CTG
Gln
>WENV183544646
OOAO01009366
186142
Bacteroidota
GAT
Ile
>WENV183543614
OOAO01000006
398836
Bacteroidota
GCA
Cys
>WENV183543655
OOAO01000031
398836
Bacteroidota
GCA
Cys
>WENV183543656
OOAO01000031
398836
Bacteroidota
GCA
Cys
>WENV183544131
OOAO01000922
398836
Bacteroidota
GCA
Cys
>WENV183544220
OOAO01001319
398836
Bacteroidota
GCA
Cys
>WENV183544368
OOAO01002464
398836
Bacteroidota
GCA
Cys
>WENV183544387
OOAO01002662
398836
Bacteroidota
GCA
Cys
>WENV183544560
OOAO01005191
398836
Bacteroidota
GCA
Cys
>WENV183544576
OOAO01005625
398836
Bacteroidota
GCA
Cys
>WENV183544453
OOAO01003329
280478
Bacteroidota
GCC
Gly
>WENV183543683
OOAO01000055
20206
Bacteroidota
GGA
Ser
>WENV183543975
OOAO01000470
20449
Bacteroidota
GGA
Ser
>WENV183544555
OOAO01005049
20449
Bacteroidota
GGA
Ser
>WENV183544286
OOAO01001720
27524
Bacteroidota
GGA
Ser
>WENV183544133
OOAO01000928
27502
Bacteroidota
GGA
Ser
>WENV183544553
OOAO01005029
27502
Bacteroidota
GGA
Ser
>WENV183543828
OOAO01000185
175902
Bacteroidota
GGC
Ala
>WENV183544298
OOAO01001822
229246
Bacteroidota
GGC
Ala
>WENV183544102
OOAO01000762
183889
Bacteroidota
GGC
Ala
>WENV183543821
OOAO01000172
172207
Bacteroidota
GGG
Pro
>WENV183544167
OOAO01001072
172207
Bacteroidota
GGG
Pro
>WENV183544360
OOAO01002424
172207
Bacteroidota
GGG
Pro
>WENV183543978
OOAO01000478
170323
Bacteroidota
GGG
Pro
>WENV183544684
OOAO01012467
405877
Bacteroidota
GGT
Thr
>WENV183543650
OOAO01000028
99847
Bacteroidota
GTA
Tyr
>WENV183544158
OOAO01001010
99847
Bacteroidota
GTA
Tyr
>WENV183543967
OOAO01000440
175906
Bacteroidota
GTG
His
>WENV183543696
OOAO01000069
175903
Bacteroidota
GTG
His
>WENV183544129
OOAO01000918
175838
Bacteroidota
GTT
Asn
>WENV183544130
OOAO01000918
175838
Bacteroidota
GTT
Asn
>WENV183544365
OOAO01002452
182267
Bacteroidota
GTT
Asn
>WENV183544366
OOAO01002452
182267
Bacteroidota
GTT
Asn
>WENV183544367
OOAO01002452
182267
Bacteroidota
GTT
Asn
>WENV183544282
OOAO01001639
186108
Bacteroidota
GTT
Asn
>WENV183543654
OOAO01000030
56072
Bacteroidota
TAA
Leu
>WENV183544223
OOAO01001335
56072
Bacteroidota
TAA
Leu
>WENV183543854
OOAO01000206
117741
Bacteroidota
TAG
Leu
>WENV183544075
OOAO01000719
118089
Bacteroidota
TAG
Leu
>WENV183544391
OOAO01002686
117804
Bacteroidota
TAG
Leu
>WENV183544048
OOAO01000628
178907
Bacteroidota
TCT
Arg
>WENV183544479
OOAO01003733
176192
Bacteroidota
TCT
Arg
>WENV183543717
OOAO01000082
69204
Bacteroidota
TGA
Ser
>WENV183543752
OOAO01000104
69204
Bacteroidota
TGA
Ser
>WENV183543792
OOAO01000144
69204
Bacteroidota
TGA
Ser
>WENV183543991
OOAO01000512
69204
Bacteroidota
TGA
Ser
>WENV183544057
OOAO01000678
69204
Bacteroidota
TGA
Ser
>WENV183544125
OOAO01000896
69204
Bacteroidota
TGA
Ser
>WENV183544279
OOAO01001626
69204
Bacteroidota
TGA
Ser
>WENV183544647
OOAO01009366
186143
Bacteroidota
TGC
Ala
>WENV183544706
OOAO01015500
169545
Bacteroidota
TGG
Pro
>WENV183543948
OOAO01000397
398871
Bacteroidota
TTC
Glu
>WENV183544438
OOAO01003171
480404
Bacteroidota
TTG
Gln
>WENV183543658
OOAO01000033
484496
Bacteroidota
TTG
Gln
>WENV183543823
OOAO01000174
484496
Bacteroidota
TTG
Gln
>WENV183544487
OOAO01003835
484496
Bacteroidota
TTG
Gln
>WENV183543691
OOAO01000066
280446
Bacteroidota
TTT
Lys
>WENV183543897
OOAO01000284
280446
Bacteroidota
TTT
Lys
>WENV183543972
OOAO01000457
280446
Bacteroidota
TTT
Lys
>WENV183544306
OOAO01001931
280446
Bacteroidota
TTT
Lys
>WENV183544375
OOAO01002520
280446
Bacteroidota
TTT
Lys
>WENV183544511
OOAO01003984
280446
Bacteroidota
TTT
Lys
>WENV183544564
OOAO01005336
280446
Bacteroidota
TTT
Lys
>WENV183543968
OOAO01000448
365112
Bacteroidota
TTT
Lys
>WENV183544312
OOAO01002019
365112
Bacteroidota
TTT
Lys
>WENV183544578
OOAO01005670
365112
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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