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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
67 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183545898
OOAT01000001
175902
Bacteroidota
GGC
Ala
>WENV183545902
OOAT01000001
398836
Bacteroidota
GCA
Cys
>WENV183545905
OOAT01000002
57807
Bacteroidota
TGA
Ser
>WENV183545909
OOAT01000002
99847
Bacteroidota
GTA
Tyr
>WENV183545907
OOAT01000002
280446
Bacteroidota
TTT
Lys
>WENV183545916
OOAT01000003
56493
Bacteroidota
TGA
Ser
>WENV183545917
OOAT01000003
398836
Bacteroidota
GCA
Cys
>WENV183545918
OOAT01000003
398836
Bacteroidota
GCA
Cys
>WENV183545924
OOAT01000007
398829
Bacteroidota
CCT
Arg
>WENV183545926
OOAT01000008
182267
Bacteroidota
GTT
Asn
>WENV183545927
OOAT01000008
182267
Bacteroidota
GTT
Asn
>WENV183545928
OOAT01000008
182267
Bacteroidota
GTT
Asn
>WENV183545929
OOAT01000008
182267
Bacteroidota
GTT
Asn
>WENV183545946
OOAT01000012
175903
Bacteroidota
GTG
His
>WENV183545945
OOAT01000012
57807
Bacteroidota
TGA
Ser
>WENV183545947
OOAT01000013
280446
Bacteroidota
TTT
Lys
>WENV183546006
OOAT01000048
280446
Bacteroidota
TTT
Lys
>WENV183546007
OOAT01000049
175838
Bacteroidota
GTT
Asn
>WENV183546008
OOAT01000049
175838
Bacteroidota
GTT
Asn
>WENV183546013
OOAT01000050
280557
Bacteroidota
CAT
Met
>WENV183546015
OOAT01000053
280557
Bacteroidota
CAT
Met
>WENV183546016
OOAT01000053
280557
Bacteroidota
CAT
Met
>WENV183546051
OOAT01000076
140771
Bacteroidota
>WENV183546054
OOAT01000082
484496
Bacteroidota
TTG
Gln
>WENV183546061
OOAT01000095
158068
Bacteroidota
GGG
Pro
>WENV183546067
OOAT01000099
280446
Bacteroidota
TTT
Lys
>WENV183546070
OOAT01000109
483416
Bacteroidota
CTG
Gln
>WENV183546089
OOAT01000131
158068
Bacteroidota
GGG
Pro
>WENV183546095
OOAT01000142
117741
Bacteroidota
TAG
Leu
>WENV183546097
OOAT01000152
56493
Bacteroidota
TGA
Ser
>WENV183546105
OOAT01000166
20206
Bacteroidota
GGA
Ser
>WENV183546104
OOAT01000166
488746
Bacteroidota
CTG
Gln
>WENV183546107
OOAT01000170
484496
Bacteroidota
TTG
Gln
>WENV183546111
OOAT01000181
186874
Bacteroidota
CAT
Met
>WENV183546112
OOAT01000183
159415
Bacteroidota
TAC
Val
>WENV183546113
OOAT01000183
159415
Bacteroidota
TAC
Val
>WENV183546124
OOAT01000197
57807
Bacteroidota
TGA
Ser
>WENV183546125
OOAT01000202
398829
Bacteroidota
CCT
Arg
>WENV183546132
OOAT01000225
332896
Bacteroidota
TTT
Lys
>WENV183546142
OOAT01000259
398836
Bacteroidota
GCA
Cys
>WENV183546143
OOAT01000265
140771
Bacteroidota
>WENV183546145
OOAT01000269
280557
Bacteroidota
CAT
Met
>WENV183546146
OOAT01000271
215303
Bacteroidota
GTC
Asp
>WENV183546169
OOAT01000326
332896
Bacteroidota
TTT
Lys
>WENV183546171
OOAT01000343
289031
Bacteroidota
CAT
Met
>WENV183546176
OOAT01000355
158068
Bacteroidota
GGG
Pro
>WENV183546181
OOAT01000371
56072
Bacteroidota
TAA
Leu
>WENV183546184
OOAT01000373
158068
Bacteroidota
GGG
Pro
>WENV183546232
OOAT01000547
176192
Bacteroidota
TCT
Arg
>WENV183546233
OOAT01000549
285360
Bacteroidota
TTT
Lys
>WENV183546234
OOAT01000560
398836
Bacteroidota
GCA
Cys
>WENV183546248
OOAT01000587
201819
Bacteroidota
CAT
Met
>WENV183546254
OOAT01000609
480404
Bacteroidota
TTG
Gln
>WENV183546263
OOAT01000665
56072
Bacteroidota
TAA
Leu
>WENV183546264
OOAT01000675
484496
Bacteroidota
TTG
Gln
>WENV183546283
OOAT01000772
158068
Bacteroidota
GGG
Pro
>WENV183546284
OOAT01000779
398828
Bacteroidota
CCG
Arg
>WENV183546328
OOAT01001037
398860
Bacteroidota
CTC
Glu
>WENV183546351
OOAT01001219
178907
Bacteroidota
TCT
Arg
>WENV183546357
OOAT01001324
280451
Bacteroidota
CGT
Thr
>WENV183546380
OOAT01001618
280557
Bacteroidota
CAT
Met
>WENV183546394
OOAT01002120
56493
Bacteroidota
TGA
Ser
>WENV183546395
OOAT01002122
398836
Bacteroidota
GCA
Cys
>WENV183546454
OOAT01003605
56493
Bacteroidota
TGA
Ser
>WENV183546517
OOAT01007031
280515
Bacteroidota
CCA
Trp
>WENV183546654
OOAT01028719
183889
Bacteroidota
GGC
Ala
>WENV183546657
OOAT01029422
398871
Bacteroidota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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