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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183551627
OOBJ01000009
481045
Bacteroidota
CCC
Gly
>WENV183551628
OOBJ01000009
178134
Bacteroidota
TGG
Pro
>WENV183551629
OOBJ01000009
178134
Bacteroidota
TGG
Pro
>WENV183551681
OOBJ01000027
172085
Bacteroidota
TAC
Val
>WENV183551682
OOBJ01000027
172085
Bacteroidota
TAC
Val
>WENV183551683
OOBJ01000028
191205
Bacteroidota
TGG
Pro
>WENV183551684
OOBJ01000028
191205
Bacteroidota
TGG
Pro
>WENV183551735
OOBJ01000038
118221
Bacteroidota
CAA
Leu
>WENV183551797
OOBJ01000072
201819
Bacteroidota
CAT
Met
>WENV183551846
OOBJ01000124
175944
Bacteroidota
CAT
Met
>WENV183551847
OOBJ01000126
201819
Bacteroidota
CAT
Met
>WENV183551857
OOBJ01000136
418894
Bacteroidota
TTC
Glu
>WENV183551858
OOBJ01000136
418894
Bacteroidota
TTC
Glu
>WENV183551873
OOBJ01000149
56072
Bacteroidota
TAA
Leu
>WENV183551883
OOBJ01000171
178134
Bacteroidota
TGG
Pro
>WENV183551899
OOBJ01000226
46648
Bacteroidota
TAA
Leu
>WENV183551901
OOBJ01000226
481328
Bacteroidota
TTG
Gln
>WENV183551907
OOBJ01000234
280446
Bacteroidota
TTT
Lys
>WENV183551917
OOBJ01000262
187400
Bacteroidota
GTT
Asn
>WENV183551921
OOBJ01000264
488746
Bacteroidota
CTG
Gln
>WENV183551931
OOBJ01000274
280446
Bacteroidota
TTT
Lys
>WENV183551946
OOBJ01000296
172085
Bacteroidota
TAC
Val
>WENV183551965
OOBJ01000313
99847
Bacteroidota
GTA
Tyr
>WENV183551981
OOBJ01000347
351598
Bacteroidota
CGG
Pro
>WENV183551984
OOBJ01000349
46648
Bacteroidota
TAA
Leu
>WENV183551986
OOBJ01000368
56493
Bacteroidota
TGA
Ser
>WENV183551988
OOBJ01000370
280557
Bacteroidota
CAT
Met
>WENV183551993
OOBJ01000396
484496
Bacteroidota
TTG
Gln
>WENV183551996
OOBJ01000402
20206
Bacteroidota
GGA
Ser
>WENV183552000
OOBJ01000412
488746
Bacteroidota
CTG
Gln
>WENV183552004
OOBJ01000440
174201
Bacteroidota
GGG
Pro
>WENV183552023
OOBJ01000486
175944
Bacteroidota
CAT
Met
>WENV183552025
OOBJ01000490
365112
Bacteroidota
TTT
Lys
>WENV183552052
OOBJ01000551
118221
Bacteroidota
CAA
Leu
>WENV183552053
OOBJ01000554
56385
Bacteroidota
TGA
Ser
>WENV183552060
OOBJ01000599
46648
Bacteroidota
TAA
Leu
>WENV183552082
OOBJ01000707
398836
Bacteroidota
GCA
Cys
>WENV183552090
OOBJ01000722
404109
Bacteroidota
CTC
Glu
>WENV183552130
OOBJ01000979
46648
Bacteroidota
TAA
Leu
>WENV183552143
OOBJ01001029
99847
Bacteroidota
GTA
Tyr
>WENV183552164
OOBJ01001176
178134
Bacteroidota
TGG
Pro
>WENV183552165
OOBJ01001176
178134
Bacteroidota
TGG
Pro
>WENV183552184
OOBJ01001294
174201
Bacteroidota
GGG
Pro
>WENV183552188
OOBJ01001331
56385
Bacteroidota
TGA
Ser
>WENV183552189
OOBJ01001331
56385
Bacteroidota
TGA
Ser
>WENV183552203
OOBJ01001465
27502
Bacteroidota
GGA
Ser
>WENV183552208
OOBJ01001483
491385
Bacteroidota
TTG
Gln
>WENV183552220
OOBJ01001666
118221
Bacteroidota
CAA
Leu
>WENV183552225
OOBJ01001689
117741
Bacteroidota
TAG
Leu
>WENV183552229
OOBJ01001706
172085
Bacteroidota
TAC
Val
>WENV183552235
OOBJ01001824
74084
Bacteroidota
CAG
Leu
>WENV183552242
OOBJ01001869
398829
Bacteroidota
CCT
Arg
>WENV183552249
OOBJ01001921
484496
Bacteroidota
TTG
Gln
>WENV183552283
OOBJ01002186
398871
Bacteroidota
TTC
Glu
>WENV183552306
OOBJ01002545
229246
Bacteroidota
GGC
Ala
>WENV183552311
OOBJ01002598
118221
Bacteroidota
CAA
Leu
>WENV183552337
OOBJ01002934
69204
Bacteroidota
TGA
Ser
>WENV183552354
OOBJ01003497
20492
Bacteroidota
GGA
Ser
>WENV183552358
OOBJ01003613
118089
Bacteroidota
TAG
Leu
>WENV183552390
OOBJ01004304
398829
Bacteroidota
CCT
Arg
>WENV183552399
OOBJ01004343
481328
Bacteroidota
TTG
Gln
>WENV183552403
OOBJ01004573
480325
Bacteroidota
CTG
Gln
>WENV183552406
OOBJ01004680
285750
Bacteroidota
CCC
Gly
>WENV183552409
OOBJ01004768
280451
Bacteroidota
CGT
Thr
>WENV183552425
OOBJ01005440
175902
Bacteroidota
GGC
Ala
>WENV183552437
OOBJ01005941
57645
Bacteroidota
TGA
Ser
>WENV183552462
OOBJ01007238
398828
Bacteroidota
CCG
Arg
>WENV183552504
OOBJ01008690
399200
Bacteroidota
CAT
Met
>WENV183552510
OOBJ01008964
20449
Bacteroidota
GGA
Ser
>WENV183552528
OOBJ01010273
189252
Bacteroidota
GGC
Ala
>WENV183552604
OOBJ01015574
175903
Bacteroidota
GTG
His
>WENV183552735
OOBJ01029587
175904
Bacteroidota
CGG
Pro
>WENV183552779
OOBJ01037864
156068
Bacteroidota
TAC
Val
>WENV183552797
OOBJ01046523
280478
Bacteroidota
GCC
Gly
>WENV183552837
OOBJ01064344
295385
Bacteroidota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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