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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183559240
OOBS01000944
140771
Bacteroidota
>WENV183559132
OOBS01000148
118221
Bacteroidota
CAA
Leu
>WENV183559308
OOBS01001965
118221
Bacteroidota
CAA
Leu
>WENV183559085
OOBS01000074
280557
Bacteroidota
CAT
Met
>WENV183559086
OOBS01000074
280557
Bacteroidota
CAT
Met
>WENV183559105
OOBS01000101
280557
Bacteroidota
CAT
Met
>WENV183559037
OOBS01000017
201819
Bacteroidota
CAT
Met
>WENV183559060
OOBS01000044
201819
Bacteroidota
CAT
Met
>WENV183559012
OOBS01000003
312035
Bacteroidota
CCA
Trp
>WENV183559195
OOBS01000498
398828
Bacteroidota
CCG
Arg
>WENV183559300
OOBS01001669
398829
Bacteroidota
CCT
Arg
>WENV183559505
OOBS01023260
280451
Bacteroidota
CGT
Thr
>WENV183559110
OOBS01000106
404109
Bacteroidota
CTC
Glu
>WENV183559111
OOBS01000106
404109
Bacteroidota
CTC
Glu
>WENV183559220
OOBS01000807
404109
Bacteroidota
CTC
Glu
>WENV183559287
OOBS01001452
404109
Bacteroidota
CTC
Glu
>WENV183559307
OOBS01001934
488746
Bacteroidota
CTG
Gln
>WENV183559004
OOBS01000001
398836
Bacteroidota
GCA
Cys
>WENV183559005
OOBS01000001
398836
Bacteroidota
GCA
Cys
>WENV183559410
OOBS01007090
398836
Bacteroidota
GCA
Cys
>WENV183559069
OOBS01000047
158068
Bacteroidota
GGG
Pro
>WENV183559243
OOBS01001010
158068
Bacteroidota
GGG
Pro
>WENV183559011
OOBS01000003
400161
Bacteroidota
GGT
Thr
>WENV183559395
OOBS01005461
99847
Bacteroidota
GTA
Tyr
>WENV183559070
OOBS01000054
187814
Bacteroidota
GTC
Asp
>WENV183559071
OOBS01000054
187814
Bacteroidota
GTC
Asp
>WENV183559072
OOBS01000054
187814
Bacteroidota
GTC
Asp
>WENV183559211
OOBS01000761
175838
Bacteroidota
GTT
Asn
>WENV183559043
OOBS01000021
182267
Bacteroidota
GTT
Asn
>WENV183559044
OOBS01000021
182267
Bacteroidota
GTT
Asn
>WENV183559145
OOBS01000183
182267
Bacteroidota
GTT
Asn
>WENV183559152
OOBS01000204
182267
Bacteroidota
GTT
Asn
>WENV183559329
OOBS01002708
182267
Bacteroidota
GTT
Asn
>WENV183559121
OOBS01000120
56072
Bacteroidota
TAA
Leu
>WENV183559030
OOBS01000012
46648
Bacteroidota
TAA
Leu
>WENV183559050
OOBS01000027
46648
Bacteroidota
TAA
Leu
>WENV183559138
OOBS01000161
46648
Bacteroidota
TAA
Leu
>WENV183559021
OOBS01000006
156422
Bacteroidota
TAC
Val
>WENV183559003
OOBS01000001
56493
Bacteroidota
TGA
Ser
>WENV183559095
OOBS01000085
56385
Bacteroidota
TGA
Ser
>WENV183559033
OOBS01000015
57807
Bacteroidota
TGA
Ser
>WENV183559259
OOBS01001216
57807
Bacteroidota
TGA
Ser
>WENV183559340
OOBS01002939
57807
Bacteroidota
TGA
Ser
>WENV183559054
OOBS01000032
191205
Bacteroidota
TGG
Pro
>WENV183559055
OOBS01000032
191205
Bacteroidota
TGG
Pro
>WENV183559082
OOBS01000065
191205
Bacteroidota
TGG
Pro
>WENV183559083
OOBS01000065
191205
Bacteroidota
TGG
Pro
>WENV183559420
OOBS01008343
418894
Bacteroidota
TTC
Glu
>WENV183559100
OOBS01000094
481328
Bacteroidota
TTG
Gln
>WENV183559027
OOBS01000012
491385
Bacteroidota
TTG
Gln
>WENV183559262
OOBS01001272
484496
Bacteroidota
TTG
Gln
>WENV183559065
OOBS01000046
282852
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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