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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183560666
OOBU01000323
235097
Bacteroidota
TTT
Lys
>WENV183560487
OOBU01000032
95987
Bacteroidota
CAA
Leu
>WENV183560485
OOBU01000031
339412
Bacteroidota
GGT
Thr
>WENV183560912
OOBU01002397
267954
Bacteroidota
GCC
Gly
>WENV183560913
OOBU01002397
267954
Bacteroidota
GCC
Gly
>WENV183560914
OOBU01002397
267954
Bacteroidota
GCC
Gly
>WENV183560737
OOBU01000566
97336
Bacteroidota
CAG
Leu
>WENV183560567
OOBU01000127
394247
Bacteroidota
CTC
Glu
>WENV183560568
OOBU01000127
394247
Bacteroidota
CTC
Glu
>WENV183560453
OOBU01000003
413663
Bacteroidota
CTG
Gln
>WENV183560452
OOBU01000003
413663
Bacteroidota
CTG
Gln
>WENV183560644
OOBU01000269
136244
Bacteroidota
TAC
Val
>WENV183560486
OOBU01000031
237797
Bacteroidota
CCA
Trp
>WENV183560948
OOBU01002859
436206
Bacteroidota
TTG
Gln
>WENV183560463
OOBU01000009
412479
Bacteroidota
TTG
Gln
>WENV183560985
OOBU01004451
338132
Bacteroidota
GCA
Cys
>WENV183560461
OOBU01000009
37076
Bacteroidota
TAA
Leu
>WENV183560807
OOBU01000874
301449
Bacteroidota
CGG
Pro
>WENV183560756
OOBU01000628
301449
Bacteroidota
CGG
Pro
>WENV183560707
OOBU01000442
235207
Bacteroidota
CAT
Met
>WENV183560706
OOBU01000442
235207
Bacteroidota
CAT
Met
>WENV183560703
OOBU01000433
235207
Bacteroidota
CAT
Met
>WENV183560682
OOBU01000377
143169
Bacteroidota
GGG
Pro
>WENV183560635
OOBU01000254
143169
Bacteroidota
GGG
Pro
>WENV183560550
OOBU01000111
143169
Bacteroidota
GGG
Pro
>WENV183560781
OOBU01000759
113604
Bacteroidota
>WENV183560986
OOBU01004472
144655
Bacteroidota
GGC
Ala
>WENV183560494
OOBU01000035
263771
Bacteroidota
CTT
Lys
>WENV183560874
OOBU01001722
44852
Bacteroidota
TAA
Leu
>WENV183560619
OOBU01000211
44852
Bacteroidota
TAA
Leu
>WENV183560943
OOBU01002750
150485
Bacteroidota
GTT
Asn
>WENV183560942
OOBU01002750
150485
Bacteroidota
GTT
Asn
>WENV183560755
OOBU01000624
150485
Bacteroidota
GTT
Asn
>WENV183560512
OOBU01000063
196394
Bacteroidota
GTC
Asp
>WENV183560511
OOBU01000063
196394
Bacteroidota
GTC
Asp
>WENV183560510
OOBU01000063
196394
Bacteroidota
GTC
Asp
>WENV183560732
OOBU01000548
239647
Bacteroidota
TTT
Lys
>WENV183560762
OOBU01000645
94703
Bacteroidota
GTA
Tyr
>WENV183560758
OOBU01000635
94703
Bacteroidota
GTA
Tyr
>WENV183560681
OOBU01000374
94703
Bacteroidota
GTA
Tyr
>WENV183560473
OOBU01000013
353927
Bacteroidota
TTC
Glu
>WENV183560472
OOBU01000013
353927
Bacteroidota
TTC
Glu
>WENV183560808
OOBU01000882
56823
Bacteroidota
TGA
Ser
>WENV183560793
OOBU01000804
56823
Bacteroidota
TGA
Ser
>WENV183560779
OOBU01000759
56823
Bacteroidota
TGA
Ser
>WENV183560620
OOBU01000212
56823
Bacteroidota
TGA
Ser
>WENV183560582
OOBU01000155
56823
Bacteroidota
TGA
Ser
>WENV183560553
OOBU01000115
56823
Bacteroidota
TGA
Ser
>WENV183560522
OOBU01000073
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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