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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183562784
OOBW01001250
280532
Bacteroidota
>WENV183562267
OOBW01000017
280557
Bacteroidota
CAT
Met
>WENV183562497
OOBW01000160
280557
Bacteroidota
CAT
Met
>WENV183562498
OOBW01000160
280557
Bacteroidota
CAT
Met
>WENV183562836
OOBW01001789
175936
Bacteroidota
CAT
Met
>WENV183562328
OOBW01000044
398828
Bacteroidota
CCG
Arg
>WENV183562209
OOBW01000002
398829
Bacteroidota
CCT
Arg
>WENV183562264
OOBW01000014
404226
Bacteroidota
CCT
Arg
>WENV183562852
OOBW01002033
399026
Bacteroidota
CCT
Arg
>WENV183562241
OOBW01000009
351598
Bacteroidota
CGG
Pro
>WENV183562472
OOBW01000135
351598
Bacteroidota
CGG
Pro
>WENV183562240
OOBW01000008
280451
Bacteroidota
CGT
Thr
>WENV183562345
OOBW01000050
488746
Bacteroidota
CTG
Gln
>WENV183562333
OOBW01000046
398836
Bacteroidota
GCA
Cys
>WENV183562667
OOBW01000475
398836
Bacteroidota
GCA
Cys
>WENV183562783
OOBW01001237
398836
Bacteroidota
GCA
Cys
>WENV183562346
OOBW01000050
20206
Bacteroidota
GGA
Ser
>WENV183562407
OOBW01000096
175902
Bacteroidota
GGC
Ala
>WENV183562876
OOBW01002884
175844
Bacteroidota
GGC
Ala
>WENV183562344
OOBW01000050
158068
Bacteroidota
GGG
Pro
>WENV183562614
OOBW01000358
158068
Bacteroidota
GGG
Pro
>WENV183562257
OOBW01000012
99847
Bacteroidota
GTA
Tyr
>WENV183562454
OOBW01000113
99847
Bacteroidota
GTA
Tyr
>WENV183562623
OOBW01000380
175903
Bacteroidota
GTG
His
>WENV183562457
OOBW01000113
175838
Bacteroidota
GTT
Asn
>WENV183562458
OOBW01000113
175838
Bacteroidota
GTT
Asn
>WENV183562243
OOBW01000010
182267
Bacteroidota
GTT
Asn
>WENV183562244
OOBW01000010
182267
Bacteroidota
GTT
Asn
>WENV183562245
OOBW01000010
182267
Bacteroidota
GTT
Asn
>WENV183562212
OOBW01000002
56072
Bacteroidota
TAA
Leu
>WENV183562660
OOBW01000440
56072
Bacteroidota
TAA
Leu
>WENV183562384
OOBW01000075
117741
Bacteroidota
TAG
Leu
>WENV183563047
OOBW01019399
117804
Bacteroidota
TAG
Leu
>WENV183562915
OOBW01004105
176192
Bacteroidota
TCT
Arg
>WENV183562332
OOBW01000046
56493
Bacteroidota
TGA
Ser
>WENV183562465
OOBW01000125
56493
Bacteroidota
TGA
Ser
>WENV183562605
OOBW01000334
56493
Bacteroidota
TGA
Ser
>WENV183562259
OOBW01000013
57807
Bacteroidota
TGA
Ser
>WENV183562545
OOBW01000226
57807
Bacteroidota
TGA
Ser
>WENV183562768
OOBW01001086
480404
Bacteroidota
TTG
Gln
>WENV183562210
OOBW01000002
484496
Bacteroidota
TTG
Gln
>WENV183562685
OOBW01000545
484496
Bacteroidota
TTG
Gln
>WENV183562615
OOBW01000358
332896
Bacteroidota
TTT
Lys
>WENV183562875
OOBW01002878
332896
Bacteroidota
TTT
Lys
>WENV183562207
OOBW01000001
332896
Bacteroidota
TTT
Lys
>WENV183562256
OOBW01000012
332896
Bacteroidota
TTT
Lys
>WENV183562602
OOBW01000332
332896
Bacteroidota
TTT
Lys
>WENV183562461
OOBW01000120
280446
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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