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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
127 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183566818
OOCB01000021
280557
Bacteroidota
CAT
Met
>WENV183566870
OOCB01000042
399200
Bacteroidota
CAT
Met
>WENV183566934
OOCB01000074
398829
Bacteroidota
CCT
Arg
>WENV183566936
OOCB01000075
170323
Bacteroidota
GGG
Pro
>WENV183566949
OOCB01000081
365112
Bacteroidota
TTT
Lys
>WENV183566977
OOCB01000097
187400
Bacteroidota
GTT
Asn
>WENV183566978
OOCB01000097
187400
Bacteroidota
GTT
Asn
>WENV183567003
OOCB01000115
280557
Bacteroidota
CAT
Met
>WENV183567004
OOCB01000115
280446
Bacteroidota
TTT
Lys
>WENV183567007
OOCB01000118
480325
Bacteroidota
CTG
Gln
>WENV183567008
OOCB01000118
480325
Bacteroidota
CTG
Gln
>WENV183567009
OOCB01000118
398836
Bacteroidota
GCA
Cys
>WENV183567023
OOCB01000128
203954
Bacteroidota
GTC
Asp
>WENV183567077
OOCB01000164
280451
Bacteroidota
CGT
Thr
>WENV183567078
OOCB01000165
201819
Bacteroidota
CAT
Met
>WENV183567107
OOCB01000175
73011
Bacteroidota
CAA
Leu
>WENV183567108
OOCB01000175
118089
Bacteroidota
TAG
Leu
>WENV183567122
OOCB01000186
117741
Bacteroidota
TAG
Leu
>WENV183567125
OOCB01000189
280478
Bacteroidota
GCC
Gly
>WENV183567136
OOCB01000193
56072
Bacteroidota
TAA
Leu
>WENV183567137
OOCB01000193
182267
Bacteroidota
GTT
Asn
>WENV183567138
OOCB01000193
182267
Bacteroidota
GTT
Asn
>WENV183567139
OOCB01000193
182267
Bacteroidota
GTT
Asn
>WENV183567148
OOCB01000203
29791
Bacteroidota
GCT
Ser
>WENV183567149
OOCB01000203
398860
Bacteroidota
CTC
Glu
>WENV183567162
OOCB01000219
280553
Bacteroidota
TTT
Lys
>WENV183567164
OOCB01000220
351598
Bacteroidota
CGG
Pro
>WENV183567184
OOCB01000240
178907
Bacteroidota
TCT
Arg
>WENV183567196
OOCB01000253
175902
Bacteroidota
GGC
Ala
>WENV183567198
OOCB01000259
175844
Bacteroidota
GGC
Ala
>WENV183567199
OOCB01000260
20206
Bacteroidota
GGA
Ser
>WENV183567234
OOCB01000308
398836
Bacteroidota
GCA
Cys
>WENV183567267
OOCB01000323
400088
Bacteroidota
GGT
Thr
>WENV183567296
OOCB01000349
280446
Bacteroidota
TTT
Lys
>WENV183567309
OOCB01000369
69204
Bacteroidota
TGA
Ser
>WENV183567326
OOCB01000386
280478
Bacteroidota
GCC
Gly
>WENV183567328
OOCB01000386
280478
Bacteroidota
GCC
Gly
>WENV183567336
OOCB01000388
175903
Bacteroidota
GTG
His
>WENV183567337
OOCB01000388
27502
Bacteroidota
GGA
Ser
>WENV183567354
OOCB01000407
280478
Bacteroidota
GCC
Gly
>WENV183567392
OOCB01000453
175906
Bacteroidota
GTG
His
>WENV183567475
OOCB01000529
140771
Bacteroidota
>WENV183567478
OOCB01000529
140771
Bacteroidota
>WENV183567516
OOCB01000579
399200
Bacteroidota
CAT
Met
>WENV183567517
OOCB01000579
399200
Bacteroidota
CAT
Met
>WENV183567594
OOCB01000694
280478
Bacteroidota
GCC
Gly
>WENV183567596
OOCB01000694
280478
Bacteroidota
GCC
Gly
>WENV183567614
OOCB01000725
484496
Bacteroidota
TTG
Gln
>WENV183567615
OOCB01000729
20449
Bacteroidota
GGA
Ser
>WENV183567629
OOCB01000740
398828
Bacteroidota
CCG
Arg
>WENV183567631
OOCB01000743
21127
Bacteroidota
GGA
Ser
>WENV183567641
OOCB01000754
398871
Bacteroidota
TTC
Glu
>WENV183567642
OOCB01000754
398871
Bacteroidota
TTC
Glu
>WENV183567643
OOCB01000754
404226
Bacteroidota
CCT
Arg
>WENV183567700
OOCB01000834
74084
Bacteroidota
CAG
Leu
>WENV183567727
OOCB01000909
203954
Bacteroidota
GTC
Asp
>WENV183567731
OOCB01000916
280446
Bacteroidota
TTT
Lys
>WENV183567757
OOCB01000953
351598
Bacteroidota
CGG
Pro
>WENV183567762
OOCB01000977
351598
Bacteroidota
CGG
Pro
>WENV183567795
OOCB01001087
483416
Bacteroidota
CTG
Gln
>WENV183567801
OOCB01001104
398836
Bacteroidota
GCA
Cys
>WENV183567803
OOCB01001111
289031
Bacteroidota
CAT
Met
>WENV183567812
OOCB01001126
203954
Bacteroidota
GTC
Asp
>WENV183567853
OOCB01001224
280532
Bacteroidota
>WENV183567857
OOCB01001248
280557
Bacteroidota
CAT
Met
>WENV183567861
OOCB01001264
117741
Bacteroidota
TAG
Leu
>WENV183567908
OOCB01001398
398836
Bacteroidota
GCA
Cys
>WENV183567909
OOCB01001400
399200
Bacteroidota
CAT
Met
>WENV183567940
OOCB01001460
176192
Bacteroidota
TCT
Arg
>WENV183568000
OOCB01001647
27502
Bacteroidota
GGA
Ser
>WENV183568001
OOCB01001647
280446
Bacteroidota
TTT
Lys
>WENV183568017
OOCB01001680
175904
Bacteroidota
CGG
Pro
>WENV183568020
OOCB01001686
488746
Bacteroidota
CTG
Gln
>WENV183568096
OOCB01001937
175936
Bacteroidota
CAT
Met
>WENV183568166
OOCB01002175
229246
Bacteroidota
GGC
Ala
>WENV183568302
OOCB01002772
118089
Bacteroidota
TAG
Leu
>WENV183568347
OOCB01002937
56493
Bacteroidota
TGA
Ser
>WENV183568348
OOCB01002969
480404
Bacteroidota
TTG
Gln
>WENV183568357
OOCB01003076
178179
Bacteroidota
GGC
Ala
>WENV183568424
OOCB01003321
175838
Bacteroidota
GTT
Asn
>WENV183568425
OOCB01003321
175838
Bacteroidota
GTT
Asn
>WENV183568427
OOCB01003321
99847
Bacteroidota
GTA
Tyr
>WENV183568448
OOCB01003428
27502
Bacteroidota
GGA
Ser
>WENV183568459
OOCB01003533
175904
Bacteroidota
CGG
Pro
>WENV183568460
OOCB01003533
280530
Bacteroidota
CCA
Trp
>WENV183568489
OOCB01003668
280515
Bacteroidota
CCA
Trp
>WENV183568499
OOCB01003734
398836
Bacteroidota
GCA
Cys
>WENV183568517
OOCB01003922
183889
Bacteroidota
GGC
Ala
>WENV183568522
OOCB01003957
285750
Bacteroidota
CCC
Gly
>WENV183568536
OOCB01004080
20449
Bacteroidota
GGA
Ser
>WENV183568537
OOCB01004103
484496
Bacteroidota
TTG
Gln
>WENV183568542
OOCB01004122
117804
Bacteroidota
TAG
Leu
>WENV183568598
OOCB01004592
186874
Bacteroidota
CAT
Met
>WENV183568599
OOCB01004597
182267
Bacteroidota
GTT
Asn
>WENV183568635
OOCB01004920
398836
Bacteroidota
GCA
Cys
>WENV183568644
OOCB01005002
99847
Bacteroidota
GTA
Tyr
>WENV183568647
OOCB01005048
186874
Bacteroidota
CAT
Met
>WENV183568715
OOCB01005986
405877
Bacteroidota
GGT
Thr
>WENV183568840
OOCB01007657
182267
Bacteroidota
GTT
Asn
>WENV183568876
OOCB01008587
172085
Bacteroidota
TAC
Val
>WENV183568877
OOCB01008587
172085
Bacteroidota
TAC
Val
>WENV183568879
OOCB01008624
373714
Bacteroidota
GCC
Gly
>WENV183568880
OOCB01008624
373714
Bacteroidota
GCC
Gly
>WENV183568934
OOCB01009712
398836
Bacteroidota
GCA
Cys
>WENV183568938
OOCB01009814
56072
Bacteroidota
TAA
Leu
>WENV183568951
OOCB01010155
365112
Bacteroidota
TTT
Lys
>WENV183568956
OOCB01010244
398836
Bacteroidota
GCA
Cys
>WENV183569012
OOCB01011810
289031
Bacteroidota
CAT
Met
>WENV183569036
OOCB01012795
483416
Bacteroidota
CTG
Gln
>WENV183569053
OOCB01013247
183889
Bacteroidota
GGC
Ala
>WENV183569068
OOCB01013788
285750
Bacteroidota
CCC
Gly
>WENV183569069
OOCB01013822
399026
Bacteroidota
CCT
Arg
>WENV183569134
OOCB01016752
484496
Bacteroidota
TTG
Gln
>WENV183569147
OOCB01017201
484496
Bacteroidota
TTG
Gln
>WENV183569149
OOCB01017363
322836
Bacteroidota
CGT
Thr
>WENV183569174
OOCB01018437
186142
Bacteroidota
GAT
Ile
>WENV183569185
OOCB01018899
280557
Bacteroidota
CAT
Met
>WENV183569214
OOCB01020177
176192
Bacteroidota
TCT
Arg
>WENV183569224
OOCB01020818
172085
Bacteroidota
TAC
Val
>WENV183569260
OOCB01022992
280530
Bacteroidota
CCA
Trp
>WENV183569361
OOCB01032877
285750
Bacteroidota
CCC
Gly
>WENV183569420
OOCB01043490
285750
Bacteroidota
CCC
Gly
>WENV183569449
OOCB01050399
365112
Bacteroidota
TTT
Lys
>WENV183569468
OOCB01055461
351598
Bacteroidota
CGG
Pro
>WENV183569481
OOCB01056477
398860
Bacteroidota
CTC
Glu
>WENV183569499
OOCB01062032
291612
Bacteroidota
>WENV183569615
OOCB01097475
186874
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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