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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
66 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183572050
OOCF01000537
140771
Bacteroidota
>WENV183571911
OOCF01000106
118221
Bacteroidota
CAA
Leu
>WENV183571983
OOCF01000306
73011
Bacteroidota
CAA
Leu
>WENV183572047
OOCF01000521
280557
Bacteroidota
CAT
Met
>WENV183572236
OOCF01002233
280557
Bacteroidota
CAT
Met
>WENV183572590
OOCF01034468
280557
Bacteroidota
CAT
Met
>WENV183572436
OOCF01008314
399200
Bacteroidota
CAT
Met
>WENV183572239
OOCF01002246
312035
Bacteroidota
CCA
Trp
>WENV183572367
OOCF01006039
398828
Bacteroidota
CCG
Arg
>WENV183572039
OOCF01000503
398829
Bacteroidota
CCT
Arg
>WENV183572035
OOCF01000448
175904
Bacteroidota
CGG
Pro
>WENV183571969
OOCF01000268
351598
Bacteroidota
CGG
Pro
>WENV183572223
OOCF01002018
351598
Bacteroidota
CGG
Pro
>WENV183572261
OOCF01002588
351598
Bacteroidota
CGG
Pro
>WENV183572419
OOCF01007743
351598
Bacteroidota
CGG
Pro
>WENV183572620
OOCF01042319
280451
Bacteroidota
CGT
Thr
>WENV183572350
OOCF01005299
398860
Bacteroidota
CTC
Glu
>WENV183571899
OOCF01000091
404109
Bacteroidota
CTC
Glu
>WENV183571900
OOCF01000091
404109
Bacteroidota
CTC
Glu
>WENV183572281
OOCF01002923
488746
Bacteroidota
CTG
Gln
>WENV183571902
OOCF01000095
398836
Bacteroidota
GCA
Cys
>WENV183571993
OOCF01000314
398836
Bacteroidota
GCA
Cys
>WENV183572292
OOCF01003115
398836
Bacteroidota
GCA
Cys
>WENV183572341
OOCF01004916
398836
Bacteroidota
GCA
Cys
>WENV183572247
OOCF01002474
373714
Bacteroidota
GCC
Gly
>WENV183572561
OOCF01025183
27502
Bacteroidota
GGA
Ser
>WENV183572316
OOCF01003764
175902
Bacteroidota
GGC
Ala
>WENV183572468
OOCF01010484
175844
Bacteroidota
GGC
Ala
>WENV183572100
OOCF01000760
172207
Bacteroidota
GGG
Pro
>WENV183572355
OOCF01005343
172207
Bacteroidota
GGG
Pro
>WENV183572504
OOCF01013823
172207
Bacteroidota
GGG
Pro
>WENV183572238
OOCF01002246
400161
Bacteroidota
GGT
Thr
>WENV183571896
OOCF01000087
405877
Bacteroidota
GGT
Thr
>WENV183572219
OOCF01001834
99847
Bacteroidota
GTA
Tyr
>WENV183572241
OOCF01002329
99847
Bacteroidota
GTA
Tyr
>WENV183572327
OOCF01004168
99847
Bacteroidota
GTA
Tyr
>WENV183572439
OOCF01008471
99847
Bacteroidota
GTA
Tyr
>WENV183572053
OOCF01000548
242241
Bacteroidota
GTC
Asp
>WENV183572054
OOCF01000548
242241
Bacteroidota
GTC
Asp
>WENV183572055
OOCF01000548
242241
Bacteroidota
GTC
Asp
>WENV183572056
OOCF01000548
242241
Bacteroidota
GTC
Asp
>WENV183572189
OOCF01001488
175903
Bacteroidota
GTG
His
>WENV183572330
OOCF01004219
175838
Bacteroidota
GTT
Asn
>WENV183572566
OOCF01026837
175838
Bacteroidota
GTT
Asn
>WENV183572084
OOCF01000693
182267
Bacteroidota
GTT
Asn
>WENV183571876
OOCF01000060
56072
Bacteroidota
TAA
Leu
>WENV183572359
OOCF01005830
56072
Bacteroidota
TAA
Leu
>WENV183571906
OOCF01000097
46648
Bacteroidota
TAA
Leu
>WENV183572266
OOCF01002651
117741
Bacteroidota
TAG
Leu
>WENV183572455
OOCF01009600
117741
Bacteroidota
TAG
Leu
>WENV183572134
OOCF01001077
118089
Bacteroidota
TAG
Leu
>WENV183572113
OOCF01000853
56493
Bacteroidota
TGA
Ser
>WENV183572257
OOCF01002553
56493
Bacteroidota
TGA
Ser
>WENV183572397
OOCF01006937
56493
Bacteroidota
TGA
Ser
>WENV183571939
OOCF01000173
56385
Bacteroidota
TGA
Ser
>WENV183572391
OOCF01006649
69204
Bacteroidota
TGA
Ser
>WENV183571859
OOCF01000031
418894
Bacteroidota
TTC
Glu
>WENV183572606
OOCF01037229
418894
Bacteroidota
TTC
Glu
>WENV183571905
OOCF01000097
481328
Bacteroidota
TTG
Gln
>WENV183572433
OOCF01008205
484496
Bacteroidota
TTG
Gln
>WENV183572017
OOCF01000406
285360
Bacteroidota
TTT
Lys
>WENV183571960
OOCF01000204
280446
Bacteroidota
TTT
Lys
>WENV183572417
OOCF01007705
280446
Bacteroidota
TTT
Lys
>WENV183572571
OOCF01028269
280446
Bacteroidota
TTT
Lys
>WENV183571916
OOCF01000114
365112
Bacteroidota
TTT
Lys
>WENV183571967
OOCF01000260
365112
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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