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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183572640
OOCG01000004
280446
Bacteroidota
TTT
Lys
>WENV183572645
OOCG01000007
351598
Bacteroidota
CGG
Pro
>WENV183572656
OOCG01000013
398828
Bacteroidota
CCG
Arg
>WENV183572657
OOCG01000014
175903
Bacteroidota
GTG
His
>WENV183572665
OOCG01000024
140771
Bacteroidota
>WENV183572668
OOCG01000025
280557
Bacteroidota
CAT
Met
>WENV183572684
OOCG01000041
332896
Bacteroidota
TTT
Lys
>WENV183572689
OOCG01000045
56493
Bacteroidota
TGA
Ser
>WENV183572691
OOCG01000048
280451
Bacteroidota
CGT
Thr
>WENV183572692
OOCG01000051
158068
Bacteroidota
GGG
Pro
>WENV183572693
OOCG01000051
488746
Bacteroidota
CTG
Gln
>WENV183572694
OOCG01000051
20766
Bacteroidota
GGA
Ser
>WENV183572697
OOCG01000064
398829
Bacteroidota
CCT
Arg
>WENV183572711
OOCG01000073
280451
Bacteroidota
CGT
Thr
>WENV183572717
OOCG01000090
175944
Bacteroidota
CAT
Met
>WENV183572722
OOCG01000095
117741
Bacteroidota
TAG
Leu
>WENV183572724
OOCG01000099
56385
Bacteroidota
TGA
Ser
>WENV183572729
OOCG01000110
175902
Bacteroidota
GGC
Ala
>WENV183572738
OOCG01000128
158068
Bacteroidota
GGG
Pro
>WENV183572741
OOCG01000145
488746
Bacteroidota
CTG
Gln
>WENV183572742
OOCG01000145
20206
Bacteroidota
GGA
Ser
>WENV183572745
OOCG01000162
398828
Bacteroidota
CCG
Arg
>WENV183572746
OOCG01000164
481328
Bacteroidota
TTG
Gln
>WENV183572750
OOCG01000187
280557
Bacteroidota
CAT
Met
>WENV183572765
OOCG01000213
57807
Bacteroidota
TGA
Ser
>WENV183572781
OOCG01000247
280557
Bacteroidota
CAT
Met
>WENV183572786
OOCG01000257
398829
Bacteroidota
CCT
Arg
>WENV183572791
OOCG01000269
404109
Bacteroidota
CTC
Glu
>WENV183572809
OOCG01000312
332896
Bacteroidota
TTT
Lys
>WENV183572817
OOCG01000337
118221
Bacteroidota
CAA
Leu
>WENV183572842
OOCG01000446
484496
Bacteroidota
TTG
Gln
>WENV183572862
OOCG01000508
481328
Bacteroidota
TTG
Gln
>WENV183572866
OOCG01000532
56493
Bacteroidota
TGA
Ser
>WENV183572872
OOCG01000571
156422
Bacteroidota
TAC
Val
>WENV183572888
OOCG01000622
398836
Bacteroidota
GCA
Cys
>WENV183572889
OOCG01000622
398836
Bacteroidota
GCA
Cys
>WENV183572897
OOCG01000679
118221
Bacteroidota
CAA
Leu
>WENV183572916
OOCG01000744
20492
Bacteroidota
GGA
Ser
>WENV183572923
OOCG01000778
182267
Bacteroidota
GTT
Asn
>WENV183572930
OOCG01000807
398836
Bacteroidota
GCA
Cys
>WENV183572938
OOCG01000824
398836
Bacteroidota
GCA
Cys
>WENV183572947
OOCG01000864
56493
Bacteroidota
TGA
Ser
>WENV183572960
OOCG01000950
57807
Bacteroidota
TGA
Ser
>WENV183572972
OOCG01001078
351598
Bacteroidota
CGG
Pro
>WENV183572977
OOCG01001109
484496
Bacteroidota
TTG
Gln
>WENV183572986
OOCG01001169
175838
Bacteroidota
GTT
Asn
>WENV183572987
OOCG01001169
175838
Bacteroidota
GTT
Asn
>WENV183572997
OOCG01001252
187814
Bacteroidota
GTC
Asp
>WENV183573003
OOCG01001280
57807
Bacteroidota
TGA
Ser
>WENV183573009
OOCG01001386
351598
Bacteroidota
CGG
Pro
>WENV183573035
OOCG01001719
404109
Bacteroidota
CTC
Glu
>WENV183573038
OOCG01001719
187814
Bacteroidota
GTC
Asp
>WENV183573047
OOCG01001751
404109
Bacteroidota
CTC
Glu
>WENV183573048
OOCG01001794
175844
Bacteroidota
GGC
Ala
>WENV183573053
OOCG01001839
332896
Bacteroidota
TTT
Lys
>WENV183573097
OOCG01002211
187814
Bacteroidota
GTC
Asp
>WENV183573110
OOCG01002546
398836
Bacteroidota
GCA
Cys
>WENV183573123
OOCG01002787
201819
Bacteroidota
CAT
Met
>WENV183573143
OOCG01003268
398836
Bacteroidota
GCA
Cys
>WENV183573169
OOCG01004249
399026
Bacteroidota
CCT
Arg
>WENV183573206
OOCG01005381
176192
Bacteroidota
TCT
Arg
>WENV183573212
OOCG01005791
404109
Bacteroidota
CTC
Glu
>WENV183573228
OOCG01006947
480404
Bacteroidota
TTG
Gln
>WENV183573229
OOCG01007111
312035
Bacteroidota
CCA
Trp
>WENV183573230
OOCG01007141
312035
Bacteroidota
CCA
Trp
>WENV183573276
OOCG01010036
29791
Bacteroidota
GCT
Ser
>WENV183573277
OOCG01010036
398860
Bacteroidota
CTC
Glu
>WENV183573305
OOCG01013414
175936
Bacteroidota
CAT
Met
>WENV183573330
OOCG01017494
400161
Bacteroidota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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