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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183583665
OOCQ01000038
140771
Bacteroidota
>WENV183583933
OOCQ01000845
118221
Bacteroidota
CAA
Leu
>WENV183584019
OOCQ01001358
289031
Bacteroidota
CAT
Met
>WENV183583737
OOCQ01000151
280557
Bacteroidota
CAT
Met
>WENV183583764
OOCQ01000215
201819
Bacteroidota
CAT
Met
>WENV183583910
OOCQ01000716
175944
Bacteroidota
CAT
Met
>WENV183584179
OOCQ01003527
399200
Bacteroidota
CAT
Met
>WENV183583707
OOCQ01000100
186874
Bacteroidota
CAT
Met
>WENV183584470
OOCQ01022541
312035
Bacteroidota
CCA
Trp
>WENV183584472
OOCQ01022741
312035
Bacteroidota
CCA
Trp
>WENV183583740
OOCQ01000153
280515
Bacteroidota
CCA
Trp
>WENV183584306
OOCQ01008220
285750
Bacteroidota
CCC
Gly
>WENV183583803
OOCQ01000289
398828
Bacteroidota
CCG
Arg
>WENV183584068
OOCQ01001908
398829
Bacteroidota
CCT
Arg
>WENV183584473
OOCQ01022753
175904
Bacteroidota
CGG
Pro
>WENV183583820
OOCQ01000339
351598
Bacteroidota
CGG
Pro
>WENV183583809
OOCQ01000304
404109
Bacteroidota
CTC
Glu
>WENV183583657
OOCQ01000024
483416
Bacteroidota
CTG
Gln
>WENV183583642
OOCQ01000014
488746
Bacteroidota
CTG
Gln
>WENV183583767
OOCQ01000220
488746
Bacteroidota
CTG
Gln
>WENV183583699
OOCQ01000091
398836
Bacteroidota
GCA
Cys
>WENV183584572
OOCQ01041746
280478
Bacteroidota
GCC
Gly
>WENV183584643
OOCQ01070220
29791
Bacteroidota
GCT
Ser
>WENV183583768
OOCQ01000220
20206
Bacteroidota
GGA
Ser
>WENV183583643
OOCQ01000014
20766
Bacteroidota
GGA
Ser
>WENV183583745
OOCQ01000158
175886
Bacteroidota
GGC
Ala
>WENV183584176
OOCQ01003470
175902
Bacteroidota
GGC
Ala
>WENV183583929
OOCQ01000811
183889
Bacteroidota
GGC
Ala
>WENV183583743
OOCQ01000157
158068
Bacteroidota
GGG
Pro
>WENV183584554
OOCQ01036822
400161
Bacteroidota
GGT
Thr
>WENV183583944
OOCQ01000899
182267
Bacteroidota
GTT
Asn
>WENV183583794
OOCQ01000264
56072
Bacteroidota
TAA
Leu
>WENV183583858
OOCQ01000514
46648
Bacteroidota
TAA
Leu
>WENV183584476
OOCQ01023260
159415
Bacteroidota
TAC
Val
>WENV183584446
OOCQ01019318
118089
Bacteroidota
TAG
Leu
>WENV183584445
OOCQ01019261
178907
Bacteroidota
TCT
Arg
>WENV183584021
OOCQ01001362
56493
Bacteroidota
TGA
Ser
>WENV183583812
OOCQ01000315
56385
Bacteroidota
TGA
Ser
>WENV183583955
OOCQ01000982
57807
Bacteroidota
TGA
Ser
>WENV183583659
OOCQ01000029
179697
Bacteroidota
TGT
Thr
>WENV183583990
OOCQ01001177
418894
Bacteroidota
TTC
Glu
>WENV183584298
OOCQ01008008
480404
Bacteroidota
TTG
Gln
>WENV183583876
OOCQ01000578
484496
Bacteroidota
TTG
Gln
>WENV183583683
OOCQ01000068
365112
Bacteroidota
TTT
Lys
>WENV183583830
OOCQ01000407
365112
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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