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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183585474
OOCS01000001
56072
Bacteroidota
TAA
Leu
>WENV183585475
OOCS01000001
398829
Bacteroidota
CCT
Arg
>WENV183585476
OOCS01000001
484496
Bacteroidota
TTG
Gln
>WENV183585477
OOCS01000002
27524
Bacteroidota
GGA
Ser
>WENV183585479
OOCS01000003
27502
Bacteroidota
GGA
Ser
>WENV183585480
OOCS01000003
174201
Bacteroidota
GGG
Pro
>WENV183585481
OOCS01000004
176192
Bacteroidota
TCT
Arg
>WENV183585485
OOCS01000006
174201
Bacteroidota
GGG
Pro
>WENV183585486
OOCS01000006
280446
Bacteroidota
TTT
Lys
>WENV183585487
OOCS01000006
488746
Bacteroidota
CTG
Gln
>WENV183585492
OOCS01000008
480318
Bacteroidota
CTG
Gln
>WENV183585493
OOCS01000008
174201
Bacteroidota
GGG
Pro
>WENV183585494
OOCS01000008
365112
Bacteroidota
TTT
Lys
>WENV183585497
OOCS01000009
280446
Bacteroidota
TTT
Lys
>WENV183585501
OOCS01000011
322836
Bacteroidota
CGT
Thr
>WENV183585516
OOCS01000014
56493
Bacteroidota
TGA
Ser
>WENV183585517
OOCS01000014
175903
Bacteroidota
GTG
His
>WENV183585518
OOCS01000014
27502
Bacteroidota
GGA
Ser
>WENV183585531
OOCS01000027
398828
Bacteroidota
CCG
Arg
>WENV183585536
OOCS01000029
175902
Bacteroidota
GGC
Ala
>WENV183585580
OOCS01000063
280446
Bacteroidota
TTT
Lys
>WENV183585586
OOCS01000071
229246
Bacteroidota
GGC
Ala
>WENV183585590
OOCS01000077
118089
Bacteroidota
TAG
Leu
>WENV183585609
OOCS01000091
351598
Bacteroidota
CGG
Pro
>WENV183585615
OOCS01000095
117804
Bacteroidota
TAG
Leu
>WENV183585624
OOCS01000103
280532
Bacteroidota
>WENV183585630
OOCS01000116
170323
Bacteroidota
GGG
Pro
>WENV183585631
OOCS01000118
480404
Bacteroidota
TTG
Gln
>WENV183585633
OOCS01000121
117741
Bacteroidota
TAG
Leu
>WENV183585634
OOCS01000123
20206
Bacteroidota
GGA
Ser
>WENV183585664
OOCS01000142
280557
Bacteroidota
CAT
Met
>WENV183585670
OOCS01000148
140771
Bacteroidota
>WENV183585677
OOCS01000155
398871
Bacteroidota
TTC
Glu
>WENV183585685
OOCS01000162
280557
Bacteroidota
CAT
Met
>WENV183585696
OOCS01000197
69204
Bacteroidota
TGA
Ser
>WENV183585702
OOCS01000205
175936
Bacteroidota
CAT
Met
>WENV183585721
OOCS01000221
484496
Bacteroidota
TTG
Gln
>WENV183585726
OOCS01000229
99847
Bacteroidota
GTA
Tyr
>WENV183585732
OOCS01000236
175838
Bacteroidota
GTT
Asn
>WENV183585733
OOCS01000236
175838
Bacteroidota
GTT
Asn
>WENV183585735
OOCS01000239
398836
Bacteroidota
GCA
Cys
>WENV183585736
OOCS01000240
399026
Bacteroidota
CCT
Arg
>WENV183585746
OOCS01000251
398836
Bacteroidota
GCA
Cys
>WENV183585782
OOCS01000310
201819
Bacteroidota
CAT
Met
>WENV183585793
OOCS01000338
203954
Bacteroidota
GTC
Asp
>WENV183585794
OOCS01000338
203954
Bacteroidota
GTC
Asp
>WENV183585814
OOCS01000361
351598
Bacteroidota
CGG
Pro
>WENV183585815
OOCS01000364
351598
Bacteroidota
CGG
Pro
>WENV183585819
OOCS01000374
99847
Bacteroidota
GTA
Tyr
>WENV183585823
OOCS01000379
20449
Bacteroidota
GGA
Ser
>WENV183585834
OOCS01000392
74084
Bacteroidota
CAG
Leu
>WENV183585848
OOCS01000443
280451
Bacteroidota
CGT
Thr
>WENV183585889
OOCS01000638
175906
Bacteroidota
GTG
His
>WENV183585890
OOCS01000638
175906
Bacteroidota
GTG
His
>WENV183585932
OOCS01000868
280553
Bacteroidota
TTT
Lys
>WENV183585933
OOCS01000870
178907
Bacteroidota
TCT
Arg
>WENV183585939
OOCS01000913
399200
Bacteroidota
CAT
Met
>WENV183585964
OOCS01001050
404226
Bacteroidota
CCT
Arg
>WENV183585997
OOCS01001243
73011
Bacteroidota
CAA
Leu
>WENV183585999
OOCS01001251
27502
Bacteroidota
GGA
Ser
>WENV183586013
OOCS01001331
400088
Bacteroidota
GGT
Thr
>WENV183586014
OOCS01001331
280530
Bacteroidota
CCA
Trp
>WENV183586022
OOCS01001426
480325
Bacteroidota
CTG
Gln
>WENV183586023
OOCS01001427
280478
Bacteroidota
GCC
Gly
>WENV183586057
OOCS01001826
280530
Bacteroidota
CCA
Trp
>WENV183586075
OOCS01002165
280478
Bacteroidota
GCC
Gly
>WENV183586076
OOCS01002165
74084
Bacteroidota
CAG
Leu
>WENV183586125
OOCS01003498
69204
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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