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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183587187
OOCU01000006
398836
Bacteroidota
GCA
Cys
>WENV183587196
OOCU01000007
280451
Bacteroidota
CGT
Thr
>WENV183587195
OOCU01000007
398828
Bacteroidota
CCG
Arg
>WENV183587202
OOCU01000009
182267
Bacteroidota
GTT
Asn
>WENV183587203
OOCU01000009
182267
Bacteroidota
GTT
Asn
>WENV183587204
OOCU01000009
182267
Bacteroidota
GTT
Asn
>WENV183587212
OOCU01000014
332896
Bacteroidota
TTT
Lys
>WENV183587226
OOCU01000016
56493
Bacteroidota
TGA
Ser
>WENV183587227
OOCU01000016
398836
Bacteroidota
GCA
Cys
>WENV183587228
OOCU01000016
398836
Bacteroidota
GCA
Cys
>WENV183587232
OOCU01000018
280530
Bacteroidota
CCA
Trp
>WENV183587242
OOCU01000022
56072
Bacteroidota
TAA
Leu
>WENV183587260
OOCU01000025
351598
Bacteroidota
CGG
Pro
>WENV183587261
OOCU01000026
280446
Bacteroidota
TTT
Lys
>WENV183587263
OOCU01000026
398836
Bacteroidota
GCA
Cys
>WENV183587274
OOCU01000032
398871
Bacteroidota
TTC
Glu
>WENV183587275
OOCU01000032
398871
Bacteroidota
TTC
Glu
>WENV183587280
OOCU01000035
140771
Bacteroidota
>WENV183587302
OOCU01000040
280557
Bacteroidota
CAT
Met
>WENV183587343
OOCU01000065
484496
Bacteroidota
TTG
Gln
>WENV183587345
OOCU01000068
20206
Bacteroidota
GGA
Ser
>WENV183587344
OOCU01000068
488746
Bacteroidota
CTG
Gln
>WENV183587346
OOCU01000068
158068
Bacteroidota
GGG
Pro
>WENV183587354
OOCU01000080
176192
Bacteroidota
TCT
Arg
>WENV183587367
OOCU01000092
280446
Bacteroidota
TTT
Lys
>WENV183587370
OOCU01000096
175903
Bacteroidota
GTG
His
>WENV183587385
OOCU01000104
56493
Bacteroidota
TGA
Ser
>WENV183587391
OOCU01000115
175904
Bacteroidota
CGG
Pro
>WENV183587400
OOCU01000123
73011
Bacteroidota
CAA
Leu
>WENV183587419
OOCU01000151
99847
Bacteroidota
GTA
Tyr
>WENV183587428
OOCU01000165
280557
Bacteroidota
CAT
Met
>WENV183587429
OOCU01000165
280557
Bacteroidota
CAT
Met
>WENV183587441
OOCU01000188
29791
Bacteroidota
GCT
Ser
>WENV183587442
OOCU01000188
398860
Bacteroidota
CTC
Glu
>WENV183587447
OOCU01000192
57807
Bacteroidota
TGA
Ser
>WENV183587450
OOCU01000197
178907
Bacteroidota
TCT
Arg
>WENV183587455
OOCU01000202
56493
Bacteroidota
TGA
Ser
>WENV183587457
OOCU01000203
56072
Bacteroidota
TAA
Leu
>WENV183587462
OOCU01000213
56493
Bacteroidota
TGA
Ser
>WENV183587465
OOCU01000220
57807
Bacteroidota
TGA
Ser
>WENV183587477
OOCU01000232
332896
Bacteroidota
TTT
Lys
>WENV183587482
OOCU01000243
118089
Bacteroidota
TAG
Leu
>WENV183587523
OOCU01000276
176192
Bacteroidota
TCT
Arg
>WENV183587526
OOCU01000294
201819
Bacteroidota
CAT
Met
>WENV183587550
OOCU01000335
332896
Bacteroidota
TTT
Lys
>WENV183587561
OOCU01000367
399200
Bacteroidota
CAT
Met
>WENV183587572
OOCU01000385
175844
Bacteroidota
GGC
Ala
>WENV183587581
OOCU01000419
117741
Bacteroidota
TAG
Leu
>WENV183587596
OOCU01000458
484496
Bacteroidota
TTG
Gln
>WENV183587602
OOCU01000474
484496
Bacteroidota
TTG
Gln
>WENV183587619
OOCU01000525
484496
Bacteroidota
TTG
Gln
>WENV183587624
OOCU01000571
175902
Bacteroidota
GGC
Ala
>WENV183587631
OOCU01000576
398872
Bacteroidota
GGT
Thr
>WENV183587630
OOCU01000576
99847
Bacteroidota
GTA
Tyr
>WENV183587637
OOCU01000596
399200
Bacteroidota
CAT
Met
>WENV183587659
OOCU01000689
399200
Bacteroidota
CAT
Met
>WENV183587667
OOCU01000724
140771
Bacteroidota
>WENV183587670
OOCU01000724
140771
Bacteroidota
>WENV183587691
OOCU01000812
332896
Bacteroidota
TTT
Lys
>WENV183587693
OOCU01000827
20449
Bacteroidota
GGA
Ser
>WENV183587696
OOCU01000836
398836
Bacteroidota
GCA
Cys
>WENV183587713
OOCU01000916
203954
Bacteroidota
GTC
Asp
>WENV183587718
OOCU01000948
332896
Bacteroidota
TTT
Lys
>WENV183587719
OOCU01000986
175844
Bacteroidota
GGC
Ala
>WENV183587722
OOCU01001027
332896
Bacteroidota
TTT
Lys
>WENV183587724
OOCU01001043
140771
Bacteroidota
>WENV183587729
OOCU01001117
332896
Bacteroidota
TTT
Lys
>WENV183587737
OOCU01001250
398836
Bacteroidota
GCA
Cys
>WENV183587741
OOCU01001356
285750
Bacteroidota
CCC
Gly
>WENV183587747
OOCU01001417
351598
Bacteroidota
CGG
Pro
>WENV183587750
OOCU01001457
175904
Bacteroidota
CGG
Pro
>WENV183587767
OOCU01001579
175838
Bacteroidota
GTT
Asn
>WENV183587768
OOCU01001579
175838
Bacteroidota
GTT
Asn
>WENV183587774
OOCU01001648
158068
Bacteroidota
GGG
Pro
>WENV183587831
OOCU01002721
280557
Bacteroidota
CAT
Met
>WENV183587886
OOCU01004599
158068
Bacteroidota
GGG
Pro
>WENV183587897
OOCU01005048
400088
Bacteroidota
GGT
Thr
>WENV183587935
OOCU01007188
99847
Bacteroidota
GTA
Tyr
>WENV183587989
OOCU01013937
56493
Bacteroidota
TGA
Ser
>WENV183588000
OOCU01015910
56493
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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