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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183591263
OOCY01000002
174201
Bacteroidota
GGG
Pro
>WENV183591265
OOCY01000002
27502
Bacteroidota
GGA
Ser
>WENV183591290
OOCY01000018
398829
Bacteroidota
CCT
Arg
>WENV183591329
OOCY01000038
156068
Bacteroidota
TAC
Val
>WENV183591330
OOCY01000038
156068
Bacteroidota
TAC
Val
>WENV183591331
OOCY01000039
365112
Bacteroidota
TTT
Lys
>WENV183591338
OOCY01000041
280557
Bacteroidota
CAT
Met
>WENV183591339
OOCY01000041
280557
Bacteroidota
CAT
Met
>WENV183591351
OOCY01000049
56493
Bacteroidota
TGA
Ser
>WENV183591426
OOCY01000112
351598
Bacteroidota
CGG
Pro
>WENV183591436
OOCY01000133
351598
Bacteroidota
CGG
Pro
>WENV183591446
OOCY01000138
56493
Bacteroidota
TGA
Ser
>WENV183591444
OOCY01000138
140771
Bacteroidota
>WENV183591457
OOCY01000162
398828
Bacteroidota
CCG
Arg
>WENV183591466
OOCY01000165
99847
Bacteroidota
GTA
Tyr
>WENV183591519
OOCY01000207
365112
Bacteroidota
TTT
Lys
>WENV183591557
OOCY01000247
20206
Bacteroidota
GGA
Ser
>WENV183591558
OOCY01000247
174201
Bacteroidota
GGG
Pro
>WENV183591556
OOCY01000247
488746
Bacteroidota
CTG
Gln
>WENV183591589
OOCY01000302
56072
Bacteroidota
TAA
Leu
>WENV183591590
OOCY01000304
280451
Bacteroidota
CGT
Thr
>WENV183591599
OOCY01000317
174201
Bacteroidota
GGG
Pro
>WENV183591670
OOCY01000452
140771
Bacteroidota
>WENV183591677
OOCY01000480
398836
Bacteroidota
GCA
Cys
>WENV183591678
OOCY01000480
398836
Bacteroidota
GCA
Cys
>WENV183591712
OOCY01000607
175838
Bacteroidota
GTT
Asn
>WENV183591713
OOCY01000607
175838
Bacteroidota
GTT
Asn
>WENV183591711
OOCY01000607
99847
Bacteroidota
GTA
Tyr
>WENV183591719
OOCY01000619
187400
Bacteroidota
GTT
Asn
>WENV183591720
OOCY01000619
187400
Bacteroidota
GTT
Asn
>WENV183591736
OOCY01000670
280557
Bacteroidota
CAT
Met
>WENV183591741
OOCY01000685
117741
Bacteroidota
TAG
Leu
>WENV183591754
OOCY01000737
484496
Bacteroidota
TTG
Gln
>WENV183591755
OOCY01000746
365112
Bacteroidota
TTT
Lys
>WENV183591758
OOCY01000750
398836
Bacteroidota
GCA
Cys
>WENV183591764
OOCY01000768
69204
Bacteroidota
TGA
Ser
>WENV183591765
OOCY01000777
175838
Bacteroidota
GTT
Asn
>WENV183591784
OOCY01000897
175902
Bacteroidota
GGC
Ala
>WENV183591794
OOCY01000992
27502
Bacteroidota
GGA
Ser
>WENV183591842
OOCY01001313
398836
Bacteroidota
GCA
Cys
>WENV183591856
OOCY01001419
27502
Bacteroidota
GGA
Ser
>WENV183591864
OOCY01001458
280446
Bacteroidota
TTT
Lys
>WENV183591923
OOCY01002159
182267
Bacteroidota
GTT
Asn
>WENV183591924
OOCY01002159
182267
Bacteroidota
GTT
Asn
>WENV183591925
OOCY01002159
182267
Bacteroidota
GTT
Asn
>WENV183591931
OOCY01002310
175902
Bacteroidota
GGC
Ala
>WENV183591938
OOCY01002530
201819
Bacteroidota
CAT
Met
>WENV183591949
OOCY01002666
69204
Bacteroidota
TGA
Ser
>WENV183591963
OOCY01002952
365112
Bacteroidota
TTT
Lys
>WENV183591979
OOCY01003405
175903
Bacteroidota
GTG
His
>WENV183591998
OOCY01004458
118089
Bacteroidota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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