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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183600066
OODI01000005
280446
Bacteroidota
TTT
Lys
>WENV183600125
OODI01000109
56072
Bacteroidota
TAA
Leu
>WENV183600143
OODI01000186
483416
Bacteroidota
CTG
Gln
>WENV183600159
OODI01000246
405877
Bacteroidota
GGT
Thr
>WENV183600189
OODI01000447
99847
Bacteroidota
GTA
Tyr
>WENV183600190
OODI01000454
21127
Bacteroidota
GGA
Ser
>WENV183600220
OODI01000706
398829
Bacteroidota
CCT
Arg
>WENV183600234
OODI01000781
57807
Bacteroidota
TGA
Ser
>WENV183600256
OODI01000903
289031
Bacteroidota
CAT
Met
>WENV183600283
OODI01001257
175844
Bacteroidota
GGC
Ala
>WENV183600286
OODI01001309
295385
Bacteroidota
CCA
Trp
>WENV183600304
OODI01001678
175903
Bacteroidota
GTG
His
>WENV183600312
OODI01001815
332896
Bacteroidota
TTT
Lys
>WENV183600333
OODI01002180
285360
Bacteroidota
TTT
Lys
>WENV183600373
OODI01003205
158068
Bacteroidota
GGG
Pro
>WENV183600419
OODI01004802
398836
Bacteroidota
GCA
Cys
>WENV183600421
OODI01004951
480404
Bacteroidota
TTG
Gln
>WENV183600440
OODI01005822
484496
Bacteroidota
TTG
Gln
>WENV183600455
OODI01006366
56493
Bacteroidota
TGA
Ser
>WENV183600456
OODI01006371
398836
Bacteroidota
GCA
Cys
>WENV183600463
OODI01006525
398836
Bacteroidota
GCA
Cys
>WENV183600481
OODI01007540
158068
Bacteroidota
GGG
Pro
>WENV183600507
OODI01009125
416636
Bacteroidota
TTC
Glu
>WENV183600524
OODI01010133
399200
Bacteroidota
CAT
Met
>WENV183600538
OODI01011340
280451
Bacteroidota
CGT
Thr
>WENV183600542
OODI01011434
280557
Bacteroidota
CAT
Met
>WENV183600546
OODI01012200
480325
Bacteroidota
CTG
Gln
>WENV183600549
OODI01012256
186874
Bacteroidota
CAT
Met
>WENV183600574
OODI01016532
280478
Bacteroidota
GCC
Gly
>WENV183600588
OODI01019353
488746
Bacteroidota
CTG
Gln
>WENV183600594
OODI01020639
175902
Bacteroidota
GGC
Ala
>WENV183600666
OODI01034289
398828
Bacteroidota
CCG
Arg
>WENV183600672
OODI01036717
398860
Bacteroidota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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