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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183602545
OODK01000007
99847
Bacteroidota
GTA
Tyr
>WENV183602559
OODK01000012
56493
Bacteroidota
TGA
Ser
>WENV183602560
OODK01000012
398836
Bacteroidota
GCA
Cys
>WENV183602561
OODK01000012
398836
Bacteroidota
GCA
Cys
>WENV183602590
OODK01000020
56493
Bacteroidota
TGA
Ser
>WENV183602591
OODK01000020
175903
Bacteroidota
GTG
His
>WENV183602597
OODK01000023
280451
Bacteroidota
CGT
Thr
>WENV183602605
OODK01000030
398829
Bacteroidota
CCT
Arg
>WENV183602620
OODK01000036
280446
Bacteroidota
TTT
Lys
>WENV183602628
OODK01000044
484496
Bacteroidota
TTG
Gln
>WENV183602636
OODK01000050
175902
Bacteroidota
GGC
Ala
>WENV183602690
OODK01000090
280557
Bacteroidota
CAT
Met
>WENV183602691
OODK01000091
175838
Bacteroidota
GTT
Asn
>WENV183602692
OODK01000091
175838
Bacteroidota
GTT
Asn
>WENV183602693
OODK01000091
175838
Bacteroidota
GTT
Asn
>WENV183602694
OODK01000091
175838
Bacteroidota
GTT
Asn
>WENV183602696
OODK01000091
99847
Bacteroidota
GTA
Tyr
>WENV183602711
OODK01000100
398836
Bacteroidota
GCA
Cys
>WENV183602712
OODK01000105
57807
Bacteroidota
TGA
Ser
>WENV183602728
OODK01000119
158068
Bacteroidota
GGG
Pro
>WENV183602758
OODK01000150
20206
Bacteroidota
GGA
Ser
>WENV183602757
OODK01000150
488746
Bacteroidota
CTG
Gln
>WENV183602762
OODK01000153
158068
Bacteroidota
GGG
Pro
>WENV183602795
OODK01000172
117741
Bacteroidota
TAG
Leu
>WENV183602850
OODK01000242
398828
Bacteroidota
CCG
Arg
>WENV183602957
OODK01000408
182267
Bacteroidota
GTT
Asn
>WENV183602958
OODK01000408
182267
Bacteroidota
GTT
Asn
>WENV183602959
OODK01000408
182267
Bacteroidota
GTT
Asn
>WENV183603173
OODK01000935
280557
Bacteroidota
CAT
Met
>WENV183603174
OODK01000935
280557
Bacteroidota
CAT
Met
>WENV183603321
OODK01002160
56493
Bacteroidota
TGA
Ser
>WENV183603348
OODK01002758
201819
Bacteroidota
CAT
Met
>WENV183603380
OODK01003765
404109
Bacteroidota
CTC
Glu
>WENV183603403
OODK01004554
191205
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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