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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183604999
OODM01000161
117741
Bacteroidota
TAG
Leu
>WENV183604796
OODM01000001
398829
Bacteroidota
CCT
Arg
>WENV183605179
OODM01000525
175838
Bacteroidota
GTT
Asn
>WENV183604857
OODM01000041
280557
Bacteroidota
CAT
Met
>WENV183605056
OODM01000243
280557
Bacteroidota
CAT
Met
>WENV183604855
OODM01000040
20206
Bacteroidota
GGA
Ser
>WENV183604799
OODM01000003
201819
Bacteroidota
CAT
Met
>WENV183604805
OODM01000006
175903
Bacteroidota
GTG
His
>WENV183604859
OODM01000045
351598
Bacteroidota
CGG
Pro
>WENV183605377
OODM01001970
351598
Bacteroidota
CGG
Pro
>WENV183604795
OODM01000001
56072
Bacteroidota
TAA
Leu
>WENV183604807
OODM01000007
57807
Bacteroidota
TGA
Ser
>WENV183605058
OODM01000250
57807
Bacteroidota
TGA
Ser
>WENV183604868
OODM01000047
175902
Bacteroidota
GGC
Ala
>WENV183604798
OODM01000002
280451
Bacteroidota
CGT
Thr
>WENV183604809
OODM01000007
99847
Bacteroidota
GTA
Tyr
>WENV183605293
OODM01001017
99847
Bacteroidota
GTA
Tyr
>WENV183605021
OODM01000201
332896
Bacteroidota
TTT
Lys
>WENV183604854
OODM01000040
488746
Bacteroidota
CTG
Gln
>WENV183604802
OODM01000004
158068
Bacteroidota
GGG
Pro
>WENV183604853
OODM01000040
158068
Bacteroidota
GGG
Pro
>WENV183604797
OODM01000002
398828
Bacteroidota
CCG
Arg
>WENV183605281
OODM01000946
140771
Bacteroidota
>WENV183604849
OODM01000037
280446
Bacteroidota
TTT
Lys
>WENV183605114
OODM01000353
280446
Bacteroidota
TTT
Lys
>WENV183605151
OODM01000477
280446
Bacteroidota
TTT
Lys
>WENV183604824
OODM01000020
484496
Bacteroidota
TTG
Gln
>WENV183605006
OODM01000169
484496
Bacteroidota
TTG
Gln
>WENV183604886
OODM01000065
398836
Bacteroidota
GCA
Cys
>WENV183605062
OODM01000256
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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