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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183608663
OODQ01000049
117741
Bacteroidota
TAG
Leu
>WENV183608648
OODQ01000041
398829
Bacteroidota
CCT
Arg
>WENV183608825
OODQ01000231
404226
Bacteroidota
CCT
Arg
>WENV183609141
OODQ01001815
175904
Bacteroidota
CGG
Pro
>WENV183608726
OODQ01000095
280557
Bacteroidota
CAT
Met
>WENV183608727
OODQ01000095
280557
Bacteroidota
CAT
Met
>WENV183608861
OODQ01000300
280557
Bacteroidota
CAT
Met
>WENV183609138
OODQ01001781
20206
Bacteroidota
GGA
Ser
>WENV183608771
OODQ01000155
56493
Bacteroidota
TGA
Ser
>WENV183608985
OODQ01000656
56493
Bacteroidota
TGA
Ser
>WENV183608860
OODQ01000294
175903
Bacteroidota
GTG
His
>WENV183609015
OODQ01000786
351598
Bacteroidota
CGG
Pro
>WENV183608637
OODQ01000030
118089
Bacteroidota
TAG
Leu
>WENV183608948
OODQ01000546
203954
Bacteroidota
GTC
Asp
>WENV183609095
OODQ01001260
29791
Bacteroidota
GCT
Ser
>WENV183608946
OODQ01000542
182267
Bacteroidota
GTT
Asn
>WENV183608947
OODQ01000542
182267
Bacteroidota
GTT
Asn
>WENV183609014
OODQ01000782
20449
Bacteroidota
GGA
Ser
>WENV183608613
OODQ01000020
56072
Bacteroidota
TAA
Leu
>WENV183608766
OODQ01000138
57807
Bacteroidota
TGA
Ser
>WENV183608970
OODQ01000616
57807
Bacteroidota
TGA
Ser
>WENV183608859
OODQ01000292
175902
Bacteroidota
GGC
Ala
>WENV183609096
OODQ01001260
398860
Bacteroidota
CTC
Glu
>WENV183608905
OODQ01000445
280451
Bacteroidota
CGT
Thr
>WENV183609266
OODQ01003517
418894
Bacteroidota
TTC
Glu
>WENV183609267
OODQ01003517
418894
Bacteroidota
TTC
Glu
>WENV183609035
OODQ01000884
399200
Bacteroidota
CAT
Met
>WENV183609063
OODQ01001079
399200
Bacteroidota
CAT
Met
>WENV183608870
OODQ01000318
488746
Bacteroidota
CTG
Gln
>WENV183609043
OODQ01000922
280478
Bacteroidota
GCC
Gly
>WENV183608914
OODQ01000460
187400
Bacteroidota
GTT
Asn
>WENV183608925
OODQ01000501
175844
Bacteroidota
GGC
Ala
>WENV183608885
OODQ01000372
158068
Bacteroidota
GGG
Pro
>WENV183608701
OODQ01000069
398828
Bacteroidota
CCG
Arg
>WENV183608865
OODQ01000314
140771
Bacteroidota
>WENV183608759
OODQ01000137
176192
Bacteroidota
TCT
Arg
>WENV183609384
OODQ01010829
400088
Bacteroidota
GGT
Thr
>WENV183608753
OODQ01000128
280446
Bacteroidota
TTT
Lys
>WENV183608923
OODQ01000487
280446
Bacteroidota
TTT
Lys
>WENV183608975
OODQ01000634
280446
Bacteroidota
TTT
Lys
>WENV183608608
OODQ01000016
484496
Bacteroidota
TTG
Gln
>WENV183608872
OODQ01000336
484496
Bacteroidota
TTG
Gln
>WENV183608890
OODQ01000394
484496
Bacteroidota
TTG
Gln
>WENV183608611
OODQ01000018
285750
Bacteroidota
CCC
Gly
>WENV183608568
OODQ01000004
365112
Bacteroidota
TTT
Lys
>WENV183608886
OODQ01000372
365112
Bacteroidota
TTT
Lys
>WENV183609334
OODQ01006286
365112
Bacteroidota
TTT
Lys
>WENV183608594
OODQ01000010
398836
Bacteroidota
GCA
Cys
>WENV183608595
OODQ01000010
398836
Bacteroidota
GCA
Cys
>WENV183608943
OODQ01000533
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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