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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183617113
OOEE01060379
120026
Bacteroidota
GTA
Tyr
>WENV183617343
OOEE01189303
223263
Bacteroidota
GTT
Asn
>WENV183617391
OOEE01222325
155786
Bacteroidota
TGG
Pro
>WENV183617392
OOEE01222325
176707
Bacteroidota
TCT
Arg
>WENV183617017
OOEE01030094
399285
Bacteroidota
TTC
Glu
>WENV183617121
OOEE01064447
181598
Bacteroidota
GTT
Asn
>WENV183617273
OOEE01141711
182371
Bacteroidota
CAT
Met
>WENV183617058
OOEE01043070
206043
Bacteroidota
GTC
Asp
>WENV183617368
OOEE01203512
399898
Bacteroidota
GGT
Thr
>WENV183617367
OOEE01203512
289409
Bacteroidota
TCC
Gly
>WENV183616986
OOEE01022290
177901
Bacteroidota
GTT
Asn
>WENV183616895
OOEE01008095
176557
Bacteroidota
CAT
Met
>WENV183616919
OOEE01010744
408604
Bacteroidota
GGT
Thr
>WENV183617335
OOEE01181642
408604
Bacteroidota
GGT
Thr
>WENV183617130
OOEE01067191
481829
Bacteroidota
GCA
Cys
>WENV183617173
OOEE01083071
437306
Bacteroidota
TTC
Glu
>WENV183617051
OOEE01040180
156424
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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