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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183618947
OOFP01006637
236929
Bacteroidota
TTT
Lys
>WENV183619034
OOFP01017471
126691
Bacteroidota
TGG
Pro
>WENV183619117
OOFP01028776
126691
Bacteroidota
TGG
Pro
>WENV183619118
OOFP01028776
126691
Bacteroidota
TGG
Pro
>WENV183619116
OOFP01028776
60611
Bacteroidota
GCT
Ser
>WENV183619154
OOFP01035074
146800
Bacteroidota
>WENV183619054
OOFP01020518
235935
Bacteroidota
TCC
Gly
>WENV183619035
OOFP01017471
145408
Bacteroidota
TCT
Arg
>WENV183619036
OOFP01017547
145555
Bacteroidota
GTC
Asp
>WENV183618849
OOFP01000767
153768
Bacteroidota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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