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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183622870
OOFW01028541
191838
Bacteroidota
CAT
Met
>WENV183622746
OOFW01004866
320669
Bacteroidota
GAA
Phe
>WENV183622776
OOFW01007690
480568
Bacteroidota
GCA
Cys
>WENV183622688
OOFW01001963
402532
Bacteroidota
GCC
Gly
>WENV183622778
OOFW01008418
209752
Bacteroidota
GGC
Ala
>WENV183622874
OOFW01031008
178179
Bacteroidota
GGC
Ala
>WENV183622761
OOFW01006512
120026
Bacteroidota
GTA
Tyr
>WENV183622927
OOFW01051663
206043
Bacteroidota
GTC
Asp
>WENV183622791
OOFW01009927
156076
Bacteroidota
TAC
Val
>WENV183622835
OOFW01020748
162868
Bacteroidota
TAC
Val
>WENV183622714
OOFW01002445
118418
Bacteroidota
TAG
Leu
>WENV183622924
OOFW01050558
186849
Bacteroidota
TCT
Arg
>WENV183622830
OOFW01018606
197245
Bacteroidota
TCT
Arg
>WENV183622958
OOFW01063373
156424
Bacteroidota
TGG
Pro
>WENV183622801
OOFW01011872
437306
Bacteroidota
TTC
Glu
>WENV183622773
OOFW01007498
399343
Bacteroidota
TTC
Glu
>WENV183622774
OOFW01007498
399343
Bacteroidota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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