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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183623133
OOFX01015066
281190
Bacteroidota
CAT
Met
>WENV183623300
OOFX01059620
281190
Bacteroidota
CAT
Met
>WENV183623195
OOFX01029281
200370
Bacteroidota
CAT
Met
>WENV183623216
OOFX01033921
402343
Bacteroidota
CCA
Trp
>WENV183623212
OOFX01032732
413853
Bacteroidota
GGT
Thr
>WENV183623210
OOFX01032732
118749
Bacteroidota
GTA
Tyr
>WENV183623249
OOFX01041408
240785
Bacteroidota
GTC
Asp
>WENV183623167
OOFX01022824
64185
Bacteroidota
TGA
Ser
>WENV183623033
OOFX01003042
399285
Bacteroidota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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