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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183629065
OOGP01002704
185890
Bacteroidota
TGC
Ala
>WENV183629076
OOGP01003227
120026
Bacteroidota
GTA
Tyr
>WENV183629077
OOGP01003227
365088
Bacteroidota
TCC
Gly
>WENV183629079
OOGP01003227
372845
Bacteroidota
CCA
Trp
>WENV183629174
OOGP01006803
176817
Bacteroidota
CAT
Met
>WENV183629197
OOGP01008407
155808
Bacteroidota
TGG
Pro
>WENV183629216
OOGP01010120
56162
Bacteroidota
TGA
Ser
>WENV183629238
OOGP01012210
155786
Bacteroidota
TGG
Pro
>WENV183629239
OOGP01012210
176707
Bacteroidota
TCT
Arg
>WENV183629241
OOGP01012861
399285
Bacteroidota
TTC
Glu
>WENV183629261
OOGP01015218
156611
Bacteroidota
TAC
Val
>WENV183629269
OOGP01015634
74253
Bacteroidota
GCT
Ser
>WENV183629270
OOGP01015634
155786
Bacteroidota
TGG
Pro
>WENV183629271
OOGP01015634
155786
Bacteroidota
TGG
Pro
>WENV183629299
OOGP01018359
223263
Bacteroidota
GTT
Asn
>WENV183629329
OOGP01024435
120026
Bacteroidota
GTA
Tyr
>WENV183629330
OOGP01024435
281336
Bacteroidota
TCC
Gly
>WENV183629443
OOGP01042526
460957
Bacteroidota
GCC
Gly
>WENV183629472
OOGP01047624
130793
Bacteroidota
TAG
Leu
>WENV183629482
OOGP01050586
118416
Bacteroidota
TAG
Leu
>WENV183629488
OOGP01051637
193718
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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