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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
67 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183631827
OOIF01000257
117741
Bacteroidota
TAG
Leu
>WENV183631739
OOIF01000159
398829
Bacteroidota
CCT
Arg
>WENV183632301
OOIF01002317
175838
Bacteroidota
GTT
Asn
>WENV183631776
OOIF01000198
404226
Bacteroidota
CCT
Arg
>WENV183632550
OOIF01005800
175904
Bacteroidota
CGG
Pro
>WENV183631960
OOIF01000538
289031
Bacteroidota
CAT
Met
>WENV183632427
OOIF01003460
289031
Bacteroidota
CAT
Met
>WENV183631795
OOIF01000214
280557
Bacteroidota
CAT
Met
>WENV183631574
OOIF01000024
20206
Bacteroidota
GGA
Ser
>WENV183631560
OOIF01000013
483416
Bacteroidota
CTG
Gln
>WENV183631927
OOIF01000479
398871
Bacteroidota
TTC
Glu
>WENV183631781
OOIF01000202
56493
Bacteroidota
TGA
Ser
>WENV183632533
OOIF01005464
175906
Bacteroidota
GTG
His
>WENV183632534
OOIF01005464
175906
Bacteroidota
GTG
His
>WENV183632161
OOIF01001352
175903
Bacteroidota
GTG
His
>WENV183631630
OOIF01000055
351598
Bacteroidota
CGG
Pro
>WENV183631640
OOIF01000072
351598
Bacteroidota
CGG
Pro
>WENV183632288
OOIF01002182
351598
Bacteroidota
CGG
Pro
>WENV183632098
OOIF01001060
291612
Bacteroidota
>WENV183632594
OOIF01007598
156068
Bacteroidota
TAC
Val
>WENV183632595
OOIF01007598
156068
Bacteroidota
TAC
Val
>WENV183632259
OOIF01001950
118089
Bacteroidota
TAG
Leu
>WENV183632551
OOIF01005800
280530
Bacteroidota
CCA
Trp
>WENV183632108
OOIF01001109
20449
Bacteroidota
GGA
Ser
>WENV183632833
OOIF01023418
178133
Bacteroidota
GAT
Ile
>WENV183631672
OOIF01000098
56072
Bacteroidota
TAA
Leu
>WENV183632255
OOIF01001936
280451
Bacteroidota
CGT
Thr
>WENV183631614
OOIF01000042
99847
Bacteroidota
GTA
Tyr
>WENV183632137
OOIF01001237
399200
Bacteroidota
CAT
Met
>WENV183632184
OOIF01001496
399200
Bacteroidota
CAT
Met
>WENV183632059
OOIF01000898
186874
Bacteroidota
CAT
Met
>WENV183631573
OOIF01000024
488746
Bacteroidota
CTG
Gln
>WENV183632376
OOIF01003032
280478
Bacteroidota
GCC
Gly
>WENV183631768
OOIF01000183
27524
Bacteroidota
GGA
Ser
>WENV183631793
OOIF01000212
186108
Bacteroidota
GTT
Asn
>WENV183632278
OOIF01002113
187400
Bacteroidota
GTT
Asn
>WENV183632865
OOIF01030323
73011
Bacteroidota
CAA
Leu
>WENV183632124
OOIF01001170
183889
Bacteroidota
GGC
Ala
>WENV183632528
OOIF01005365
480318
Bacteroidota
CTG
Gln
>WENV183631950
OOIF01000523
398828
Bacteroidota
CCG
Arg
>WENV183632385
OOIF01003058
74084
Bacteroidota
CAG
Leu
>WENV183632396
OOIF01003150
480325
Bacteroidota
CTG
Gln
>WENV183631714
OOIF01000135
69204
Bacteroidota
TGA
Ser
>WENV183631576
OOIF01000024
280446
Bacteroidota
TTT
Lys
>WENV183631674
OOIF01000100
280446
Bacteroidota
TTT
Lys
>WENV183631797
OOIF01000221
280446
Bacteroidota
TTT
Lys
>WENV183632573
OOIF01006726
280446
Bacteroidota
TTT
Lys
>WENV183631799
OOIF01000224
484496
Bacteroidota
TTG
Gln
>WENV183631873
OOIF01000322
484496
Bacteroidota
TTG
Gln
>WENV183632690
OOIF01011456
484496
Bacteroidota
TTG
Gln
>WENV183631675
OOIF01000100
27502
Bacteroidota
GGA
Ser
>WENV183631766
OOIF01000177
27502
Bacteroidota
GGA
Ser
>WENV183631979
OOIF01000605
27502
Bacteroidota
GGA
Ser
>WENV183632422
OOIF01003378
27502
Bacteroidota
GGA
Ser
>WENV183632281
OOIF01002145
285750
Bacteroidota
CCC
Gly
>WENV183631984
OOIF01000612
188555
Bacteroidota
CAT
Met
>WENV183631863
OOIF01000303
365112
Bacteroidota
TTT
Lys
>WENV183632036
OOIF01000793
365112
Bacteroidota
TTT
Lys
>WENV183632844
OOIF01026261
365112
Bacteroidota
TTT
Lys
>WENV183631851
OOIF01000278
398836
Bacteroidota
GCA
Cys
>WENV183631867
OOIF01000308
398836
Bacteroidota
GCA
Cys
>WENV183632181
OOIF01001460
398836
Bacteroidota
GCA
Cys
>WENV183632359
OOIF01002874
398836
Bacteroidota
GCA
Cys
>WENV183631575
OOIF01000024
170323
Bacteroidota
GGG
Pro
>WENV183632095
OOIF01001048
170323
Bacteroidota
GGG
Pro
>WENV183632217
OOIF01001734
170323
Bacteroidota
GGG
Pro
>WENV183632395
OOIF01003146
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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