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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183640203
OQVL01002032
118221
Bacteroidota
CAA
Leu
>WENV183639937
OQVL01000369
201819
Bacteroidota
CAT
Met
>WENV183641679
OQVL01064117
175944
Bacteroidota
CAT
Met
>WENV183641888
OQVL01097671
312035
Bacteroidota
CCA
Trp
>WENV183641094
OQVL01019596
481045
Bacteroidota
CCC
Gly
>WENV183641117
OQVL01020641
175904
Bacteroidota
CGG
Pro
>WENV183640827
OQVL01011701
404109
Bacteroidota
CTC
Glu
>WENV183641904
OQVL01100068
189252
Bacteroidota
GGC
Ala
>WENV183640129
OQVL01001358
170323
Bacteroidota
GGG
Pro
>WENV183640122
OQVL01001348
400161
Bacteroidota
GGT
Thr
>WENV183640600
OQVL01006874
242241
Bacteroidota
GTC
Asp
>WENV183640778
OQVL01010638
242241
Bacteroidota
GTC
Asp
>WENV183641891
OQVL01097822
215303
Bacteroidota
GTC
Asp
>WENV183640441
OQVL01004526
178571
Bacteroidota
GTT
Asn
>WENV183641776
OQVL01076368
187400
Bacteroidota
GTT
Asn
>WENV183640102
OQVL01001194
46648
Bacteroidota
TAA
Leu
>WENV183640382
OQVL01003722
157895
Bacteroidota
TAC
Val
>WENV183641772
OQVL01075755
178907
Bacteroidota
TCT
Arg
>WENV183641190
OQVL01023701
56385
Bacteroidota
TGA
Ser
>WENV183641455
OQVL01042059
56385
Bacteroidota
TGA
Ser
>WENV183641852
OQVL01088574
178134
Bacteroidota
TGG
Pro
>WENV183641572
OQVL01053726
191205
Bacteroidota
TGG
Pro
>WENV183641990
OQVL01119270
179697
Bacteroidota
TGT
Thr
>WENV183641614
OQVL01057031
418894
Bacteroidota
TTC
Glu
>WENV183641121
OQVL01020823
481328
Bacteroidota
TTG
Gln
>WENV183640884
OQVL01013219
491385
Bacteroidota
TTG
Gln
>WENV183639922
OQVL01000298
282852
Bacteroidota
TTT
Lys
>WENV183640114
OQVL01001271
282852
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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