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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183642301
OQVN01001320
400161
Bacteroidota
GGT
Thr
>WENV183642259
OQVN01000787
118221
Bacteroidota
CAA
Leu
>WENV183642808
OQVN01036563
56493
Bacteroidota
TGA
Ser
>WENV183642489
OQVN01004877
118089
Bacteroidota
TAG
Leu
>WENV183642386
OQVN01002247
178907
Bacteroidota
TCT
Arg
>WENV183642367
OQVN01001853
56385
Bacteroidota
TGA
Ser
>WENV183642770
OQVN01029797
312035
Bacteroidota
CCA
Trp
>WENV183642278
OQVN01000964
404109
Bacteroidota
CTC
Glu
>WENV183642249
OQVN01000700
46648
Bacteroidota
TAA
Leu
>WENV183642524
OQVN01006629
280478
Bacteroidota
GCC
Gly
>WENV183642284
OQVN01001049
187814
Bacteroidota
GTC
Asp
>WENV183642286
OQVN01001076
187814
Bacteroidota
GTC
Asp
>WENV183642557
OQVN01008300
187814
Bacteroidota
GTC
Asp
>WENV183642225
OQVN01000450
178134
Bacteroidota
TGG
Pro
>WENV183642192
OQVN01000185
158068
Bacteroidota
GGG
Pro
>WENV183642219
OQVN01000379
481328
Bacteroidota
TTG
Gln
>WENV183642350
OQVN01001635
481328
Bacteroidota
TTG
Gln
>WENV183642625
OQVN01013562
280446
Bacteroidota
TTT
Lys
>WENV183642426
OQVN01002803
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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